Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RNA5SP441-201ENST00000516809 88 ntBASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 AC006512.2-201ENST00000543250 486 ntBASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 AL845552.1-201ENST00000556820 323 ntBASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 GLYATL1P2-202ENST00000588046 902 ntBASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 NPIPB1P-202ENST00000588786 828 ntBASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 DYNLL1P1-201ENST00000595442 269 ntBASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 AP005229.2-201ENST00000609980 697 ntBASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 AP000894.4-201ENST00000610185 483 ntBASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 AL135999.3-201ENST00000610501 812 ntBASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 IFIT1P1-201ENST00000400497 1449 ntBASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 NEPNP-201ENST00000404786 1371 ntBASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.8□□□□□ -1.48
SIMC1Q8NDZ2 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 MFSD8-219ENST00000641228 2559 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 MIR188-201ENST00000385034 86 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 AC119751.3-201ENST00000399720 670 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 RN7SKP182-201ENST00000410772 298 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 RPL22P18-201ENST00000417197 377 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 AC007562.1-201ENST00000421819 517 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 AC241520.1-201ENST00000422654 1099 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 REREP1Y-201ENST00000422655 198 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 PTP4A1P7-201ENST00000423476 514 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 MUPP-201ENST00000438111 566 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 REREP2Y-201ENST00000439103 200 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 AC023274.2-201ENST00000445264 521 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 AL590004.3-202ENST00000445883 451 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 HIGD1AP16-201ENST00000450986 258 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 LRRC37A14P-201ENST00000452297 462 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 RN7SL214P-201ENST00000487317 265 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 EIF1P7-201ENST00000487533 337 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 RN7SL205P-201ENST00000490174 284 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 HMGB1P38-201ENST00000490557 577 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 PRELID3BP7-201ENST00000503606 469 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 CDH12P2-201ENST00000504393 298 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 SNX18P24-201ENST00000505249 671 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 AC010486.2-201ENST00000505572 483 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 AC112484.3-201ENST00000505910 329 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 KHDC1P1-201ENST00000511053 508 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 RNU6-1308P-201ENST00000516817 103 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 AP004609.2-201ENST00000532177 190 ntBASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.79□□□□□ -1.48
SIMC1Q8NDZ2 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms