Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MIR8080-201ENST00000622224 89 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 ICE2P1-201ENST00000512800 1849 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 RNA5SP319-201ENST00000362768 119 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 AC009804.1-201ENST00000400949 179 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 MIR937-201ENST00000401271 86 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 NANOGP4-201ENST00000427230 913 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 NPM1P22-201ENST00000427761 952 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 HSPD1P12-201ENST00000429127 1069 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 RPL7AP49-201ENST00000429522 581 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 AL591438.1-201ENST00000433508 581 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 PRPF38AP1-201ENST00000451976 933 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 LDHBP2-201ENST00000456969 1005 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 MTND3P6-201ENST00000485242 339 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 RN7SL30P-201ENST00000488416 306 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 OR2A3P-201ENST00000493774 953 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 AC008953.1-201ENST00000497334 318 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 IGBP1P4-201ENST00000503202 879 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 AC098976.1-201ENST00000513014 541 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 RNU6-1334P-201ENST00000516032 105 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 AC004825.1-201ENST00000555068 586 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 AC096586.2-201ENST00000610260 441 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 CASC19-264ENST00000641912 1184 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 SAMMSON-213ENST00000641336 1521 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 THAP12P5-201ENST00000405864 2275 ntBASIC5.07□□□□□ -1.6
CCDC71Q8IV32 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC71Q8IV32 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 RNA5SP131-201ENST00000365452 119 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 COX5BP7-201ENST00000414780 274 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 AC244453.4-201ENST00000419150 388 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 NENFP1-201ENST00000419476 466 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 OR6C64P-201ENST00000419708 825 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 GAPDHP58-201ENST00000438477 1006 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 MTCYBP14-201ENST00000457471 715 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 RN7SL570P-201ENST00000484405 292 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 OR11I1P-201ENST00000486033 954 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 AC093270.2-201ENST00000486157 792 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 COX6B1P2-201ENST00000489624 230 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 PMS2P3-207ENST00000529061 717 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 AC025423.2-201ENST00000537570 439 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 AC068993.1-201ENST00000546724 589 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 AL122125.1-201ENST00000616999 600 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 AC008115.4-201ENST00000619780 775 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 MTCO1P1-201ENST00000624263 1081 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms