Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 MAL2-207ENST00000522828 603 ntTSL 3 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AP002373.2-201ENST00000541631 1060 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AP003465.2-201ENST00000602571 373 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AP000254.1-201ENST00000609934 520 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AC109347.2-201ENST00000610220 349 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 CDRT1-208ENST00000630868 794 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 ATE1-AS1-202ENST00000636460 506 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 CASC19-212ENST00000641153 1287 ntBASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS4Q8IUM7 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC096992.2-201ENST00000609553 1684 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC034111.1-201ENST00000562143 3770 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 RNA5SP65-201ENST00000363166 119 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 RNU5D-1-201ENST00000363299 116 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC092642.1-201ENST00000392417 425 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 RNU2-42P-201ENST00000410697 113 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC017035.1-201ENST00000411999 1115 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC115283.1-201ENST00000427353 400 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC124944.2-201ENST00000429866 1242 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 CBX1P4-201ENST00000439415 457 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 EIF5AP4-201ENST00000441206 465 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 MTND1P30-201ENST00000441241 901 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 TAF9P1-201ENST00000445421 515 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 DNAJB5P1-201ENST00000454004 806 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 TAF9P2-201ENST00000454958 515 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 RN7SL254P-201ENST00000460609 284 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 NDUFA5P5-201ENST00000468361 342 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 NCOR1P1-202ENST00000486162 291 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 H3F3AP3-201ENST00000497682 407 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AL390816.3-201ENST00000604527 1066 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC112220.3-201ENST00000605502 502 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC015982.1-201ENST00000608113 465 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC087241.4-201ENST00000612441 480 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC008083.4-201ENST00000615076 444 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 U1.41-201ENST00000617626 165 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC022400.9-201ENST00000623633 273 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC092656.1-203ENST00000624134 423 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AL356121.2-201ENST00000624715 780 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC073488.9-201ENST00000631601 754 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 ZNF833P-201ENST00000424938 1494 ntBASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS4Q8IUM7 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms