Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH1Q08174 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
PCDH1Q08174 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDH1Q08174 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH1Q08174 LPAL2-203ENST00000454031 2498 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH1Q08174 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH1Q08174 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDH1Q08174 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDH1Q08174 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH1Q08174 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDH1Q08174 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH1Q08174 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
PCDH1Q08174 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
PCDH1Q08174 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH1Q08174 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH1Q08174 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDH1Q08174 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDH1Q08174 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PCDH1Q08174 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDH1Q08174 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
PCDH1Q08174 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 AC008033.1-201ENST00000216407 1162 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 RPL21P132-201ENST00000331267 462 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 RNU6-181P-201ENST00000363225 107 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 U3.14-201ENST00000365363 227 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 RPL9P21-201ENST00000392269 505 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 AL359715.1-201ENST00000404330 555 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 RPL17P12-201ENST00000413391 526 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDH1Q08174 AC009237.2-201ENST00000421358 284 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 AC104843.2-201ENST00000427666 297 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 MYO5BP3-201ENST00000431872 1279 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDH1Q08174 AC092427.1-201ENST00000439177 601 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDH1Q08174 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDH1Q08174 MTND6P5-201ENST00000448266 512 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDH1Q08174 AL929410.2-201ENST00000451170 189 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDH1Q08174 AC110749.1-201ENST00000462007 357 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDH1Q08174 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDH1Q08174 ARL2BPP6-201ENST00000512757 439 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 IGHV3-63-201ENST00000518422 341 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDH1Q08174 IGLVV-66-201ENST00000523818 341 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 HNRNPCP8-201ENST00000528764 888 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDH1Q08174 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDH1Q08174 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDH1Q08174 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDH1Q08174 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDH1Q08174 AL132640.2-202ENST00000559732 614 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 AC024614.1-201ENST00000577546 307 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 AC087575.1-201ENST00000585087 229 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDH1Q08174 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDH1Q08174 AC078795.3-201ENST00000602913 472 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 AC007255.2-201ENST00000604053 631 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 AC139493.1-201ENST00000604368 397 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 AL513218.1-201ENST00000606527 391 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 AC012510.1-201ENST00000607946 759 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 AC007038.2-201ENST00000608095 740 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 AC007497.1-201ENST00000610421 561 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 AL121757.2-201ENST00000611223 313 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDH1Q08174 AC131009.3-201ENST00000621809 287 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDH1Q08174 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDH1Q08174 LRRC77P-213ENST00000637727 880 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 AC011471.4-201ENST00000638271 216 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 MAPK10-365ENST00000641902 3825 ntBASIC6.74□□□□□ -1.33
PCDH1Q08174 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDH1Q08174 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDH1Q08174 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PCDH1Q08174 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDH1Q08174 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDH1Q08174 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH1Q08174 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms