Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TPM4P67936 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
TPM4P67936 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.76□□□□□ -1.49
TPM4P67936 AC007342.5-201ENST00000571340 2142 ntBASIC5.75□□□□□ -1.49
TPM4P67936 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TPM4P67936 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
TPM4P67936 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.75□□□□□ -1.49
TPM4P67936 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
TPM4P67936 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TPM4P67936 RNA5SP46-201ENST00000362370 120 ntBASIC5.75□□□□□ -1.49
TPM4P67936 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TPM4P67936 AC013442.1-201ENST00000397347 228 ntBASIC5.75□□□□□ -1.49
TPM4P67936 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.75□□□□□ -1.49
TPM4P67936 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.75□□□□□ -1.49
TPM4P67936 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.75□□□□□ -1.49
TPM4P67936 AL139148.1-201ENST00000427122 680 ntBASIC5.75□□□□□ -1.49
TPM4P67936 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.75□□□□□ -1.49
TPM4P67936 AC110602.1-201ENST00000437414 318 ntBASIC5.75□□□□□ -1.49
TPM4P67936 AL136455.1-201ENST00000441083 1240 ntBASIC5.75□□□□□ -1.49
TPM4P67936 AC104634.1-201ENST00000452720 462 ntBASIC5.75□□□□□ -1.49
TPM4P67936 RN7SL447P-201ENST00000494711 245 ntBASIC5.75□□□□□ -1.49
TPM4P67936 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.75□□□□□ -1.49
TPM4P67936 AC073358.1-201ENST00000505671 684 ntBASIC5.75□□□□□ -1.49
TPM4P67936 AC097173.1-201ENST00000505862 819 ntBASIC5.75□□□□□ -1.49
TPM4P67936 RNA5SP249-201ENST00000516127 99 ntBASIC5.75□□□□□ -1.49
TPM4P67936 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.75□□□□□ -1.49
TPM4P67936 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.75□□□□□ -1.49
TPM4P67936 HMGB1P40-201ENST00000525121 540 ntBASIC5.75□□□□□ -1.49
TPM4P67936 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
TPM4P67936 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.75□□□□□ -1.49
TPM4P67936 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.75□□□□□ -1.49
TPM4P67936 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.75□□□□□ -1.49
TPM4P67936 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.75□□□□□ -1.49
TPM4P67936 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.75□□□□□ -1.49
TPM4P67936 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TPM4P67936 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.75□□□□□ -1.49
TPM4P67936 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TPM4P67936 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
TPM4P67936 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
TPM4P67936 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.75□□□□□ -1.49
TPM4P67936 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.75□□□□□ -1.49
TPM4P67936 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TPM4P67936 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.75□□□□□ -1.49
TPM4P67936 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
TPM4P67936 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TPM4P67936 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TPM4P67936 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TPM4P67936 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.74□□□□□ -1.49
TPM4P67936 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.74□□□□□ -1.49
TPM4P67936 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TPM4P67936 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TPM4P67936 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TPM4P67936 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.74□□□□□ -1.49
TPM4P67936 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TPM4P67936 AC005522.1-201ENST00000395416 346 ntBASIC5.74□□□□□ -1.49
TPM4P67936 U3.32-201ENST00000408116 212 ntBASIC5.74□□□□□ -1.49
TPM4P67936 RN7SKP125-201ENST00000410481 302 ntBASIC5.74□□□□□ -1.49
TPM4P67936 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.74□□□□□ -1.49
TPM4P67936 RANP7-201ENST00000418085 644 ntBASIC5.74□□□□□ -1.49
TPM4P67936 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.74□□□□□ -1.49
TPM4P67936 TNPO1P1-201ENST00000423641 1138 ntBASIC5.74□□□□□ -1.49
TPM4P67936 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.74□□□□□ -1.49
TPM4P67936 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.74□□□□□ -1.49
TPM4P67936 RPS29P10-201ENST00000439197 166 ntBASIC5.74□□□□□ -1.49
TPM4P67936 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.74□□□□□ -1.49
TPM4P67936 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.74□□□□□ -1.49
TPM4P67936 HLA-DPA3-207ENST00000454398 229 ntBASIC5.74□□□□□ -1.49
TPM4P67936 SEPT7P3-201ENST00000455017 621 ntBASIC5.74□□□□□ -1.49
TPM4P67936 AC005412.2-201ENST00000492004 341 ntBASIC5.74□□□□□ -1.49
TPM4P67936 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.74□□□□□ -1.49
TPM4P67936 AC027308.1-201ENST00000517993 110 ntBASIC5.74□□□□□ -1.49
TPM4P67936 AC012400.1-201ENST00000518452 381 ntBASIC5.74□□□□□ -1.49
TPM4P67936 TRIM77BP-201ENST00000524985 1119 ntBASIC5.74□□□□□ -1.49
TPM4P67936 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.74□□□□□ -1.49
TPM4P67936 AC079315.1-201ENST00000602952 623 ntBASIC5.74□□□□□ -1.49
TPM4P67936 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TPM4P67936 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TPM4P67936 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TPM4P67936 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.73□□□□□ -1.49
TPM4P67936 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TPM4P67936 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
TPM4P67936 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.73□□□□□ -1.49
TPM4P67936 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.73□□□□□ -1.49
TPM4P67936 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TPM4P67936 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.73□□□□□ -1.49
TPM4P67936 RNA5SP319-201ENST00000362768 119 ntBASIC5.73□□□□□ -1.49
TPM4P67936 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.73□□□□□ -1.49
TPM4P67936 EEF1B2P8-201ENST00000414101 671 ntBASIC5.73□□□□□ -1.49
TPM4P67936 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.73□□□□□ -1.49
TPM4P67936 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.73□□□□□ -1.49
TPM4P67936 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.73□□□□□ -1.49
TPM4P67936 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.73□□□□□ -1.49
TPM4P67936 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.73□□□□□ -1.49
TPM4P67936 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.73□□□□□ -1.49
TPM4P67936 HMGB1P19-201ENST00000517578 577 ntBASIC5.73□□□□□ -1.49
TPM4P67936 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.73□□□□□ -1.49
TPM4P67936 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.73□□□□□ -1.49
TPM4P67936 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.73□□□□□ -1.49
TPM4P67936 EIF4A2P5-201ENST00000529914 499 ntBASIC5.73□□□□□ -1.49
TPM4P67936 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms