Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PBX3P40426 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PBX3P40426 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PBX3P40426 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.83□□□□□ -1.48
PBX3P40426 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PBX3P40426 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
PBX3P40426 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PBX3P40426 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PBX3P40426 SNORD65-201ENST00000391079 73 ntBASIC5.83□□□□□ -1.48
PBX3P40426 AL133270.1-201ENST00000402635 279 ntBASIC5.83□□□□□ -1.48
PBX3P40426 RBMY2KP-201ENST00000418221 992 ntBASIC5.83□□□□□ -1.48
PBX3P40426 SETP10-201ENST00000424368 814 ntBASIC5.83□□□□□ -1.48
PBX3P40426 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PBX3P40426 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.83□□□□□ -1.48
PBX3P40426 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.83□□□□□ -1.48
PBX3P40426 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.83□□□□□ -1.48
PBX3P40426 MTND6P32-201ENST00000457611 483 ntBASIC5.83□□□□□ -1.48
PBX3P40426 EIF2S2P4-201ENST00000461070 984 ntBASIC5.83□□□□□ -1.48
PBX3P40426 AC090114.3-201ENST00000479267 829 ntBASIC5.83□□□□□ -1.48
PBX3P40426 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.83□□□□□ -1.48
PBX3P40426 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.83□□□□□ -1.48
PBX3P40426 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.83□□□□□ -1.48
PBX3P40426 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.83□□□□□ -1.48
PBX3P40426 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PBX3P40426 RNU6-467P-201ENST00000517027 110 ntBASIC5.83□□□□□ -1.48
PBX3P40426 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.83□□□□□ -1.48
PBX3P40426 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.83□□□□□ -1.48
PBX3P40426 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.83□□□□□ -1.48
PBX3P40426 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.83□□□□□ -1.48
PBX3P40426 MIR4646-201ENST00000580775 63 ntBASIC5.83□□□□□ -1.48
PBX3P40426 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.83□□□□□ -1.48
PBX3P40426 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.83□□□□□ -1.48
PBX3P40426 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.83□□□□□ -1.48
PBX3P40426 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.83□□□□□ -1.48
PBX3P40426 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PBX3P40426 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PBX3P40426 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PBX3P40426 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PBX3P40426 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.83□□□□□ -1.48
PBX3P40426 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PBX3P40426 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.83□□□□□ -1.48
PBX3P40426 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.83□□□□□ -1.48
PBX3P40426 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.83□□□□□ -1.48
PBX3P40426 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.83□□□□□ -1.48
PBX3P40426 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.82□□□□□ -1.48
PBX3P40426 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PBX3P40426 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PBX3P40426 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.82□□□□□ -1.48
PBX3P40426 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PBX3P40426 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
PBX3P40426 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PBX3P40426 Z95114.1-201ENST00000624264 14574 ntBASIC5.82□□□□□ -1.48
PBX3P40426 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PBX3P40426 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PBX3P40426 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PBX3P40426 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PBX3P40426 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PBX3P40426 CCNB2P1-201ENST00000399411 1150 ntBASIC5.82□□□□□ -1.48
PBX3P40426 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.82□□□□□ -1.48
PBX3P40426 U3.36-201ENST00000408418 213 ntBASIC5.82□□□□□ -1.48
PBX3P40426 RPL37P18-201ENST00000411602 243 ntBASIC5.82□□□□□ -1.48
PBX3P40426 AC093162.1-201ENST00000419682 124 ntBASIC5.82□□□□□ -1.48
PBX3P40426 GLUD1P9-201ENST00000420997 1173 ntBASIC5.82□□□□□ -1.48
PBX3P40426 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.82□□□□□ -1.48
PBX3P40426 AC021876.1-201ENST00000425959 359 ntBASIC5.82□□□□□ -1.48
PBX3P40426 AL606490.7-201ENST00000433136 191 ntBASIC5.82□□□□□ -1.48
PBX3P40426 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.82□□□□□ -1.48
PBX3P40426 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.82□□□□□ -1.48
PBX3P40426 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.82□□□□□ -1.48
PBX3P40426 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.82□□□□□ -1.48
PBX3P40426 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.82□□□□□ -1.48
PBX3P40426 snoU13.29-201ENST00000459370 104 ntBASIC5.82□□□□□ -1.48
PBX3P40426 SUMO2P4-201ENST00000504193 276 ntBASIC5.82□□□□□ -1.48
PBX3P40426 ST13P12-201ENST00000508958 1094 ntBASIC5.82□□□□□ -1.48
PBX3P40426 RN7SKP66-201ENST00000516681 231 ntBASIC5.82□□□□□ -1.48
PBX3P40426 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.82□□□□□ -1.48
PBX3P40426 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.82□□□□□ -1.48
PBX3P40426 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
PBX3P40426 AC092868.3-201ENST00000560515 784 ntBASIC5.82□□□□□ -1.48
PBX3P40426 AC114947.2-201ENST00000565748 2125 ntBASIC5.82□□□□□ -1.48
PBX3P40426 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.82□□□□□ -1.48
PBX3P40426 AP000769.2-201ENST00000602344 396 ntBASIC5.82□□□□□ -1.48
PBX3P40426 AC040174.2-201ENST00000602701 465 ntBASIC5.82□□□□□ -1.48
PBX3P40426 RMST_5.1-201ENST00000618704 126 ntBASIC5.82□□□□□ -1.48
PBX3P40426 AL445528.2-201ENST00000620582 470 ntBASIC5.82□□□□□ -1.48
PBX3P40426 AL356490.1-201ENST00000623079 479 ntBASIC5.82□□□□□ -1.48
PBX3P40426 AP002799.1-201ENST00000623552 423 ntBASIC5.82□□□□□ -1.48
PBX3P40426 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PBX3P40426 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PBX3P40426 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
PBX3P40426 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PBX3P40426 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PBX3P40426 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PBX3P40426 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PBX3P40426 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PBX3P40426 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PBX3P40426 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PBX3P40426 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PBX3P40426 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PBX3P40426 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms