Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
RFX1P22670 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.67□□□□□ -1.18
RFX1P22670 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 VPS35P1-201ENST00000563400 1518 ntBASIC7.67□□□□□ -1.18
RFX1P22670 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
RFX1P22670 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.67□□□□□ -1.18
RFX1P22670 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
RFX1P22670 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
RFX1P22670 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.66□□□□□ -1.18
RFX1P22670 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
RFX1P22670 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.66□□□□□ -1.18
RFX1P22670 AC132219.2-201ENST00000624416 2327 ntBASIC7.66□□□□□ -1.18
RFX1P22670 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.66□□□□□ -1.18
RFX1P22670 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 RPL12P13-201ENST00000310055 497 ntBASIC7.66□□□□□ -1.18
RFX1P22670 OR4G2P-201ENST00000328113 903 ntBASIC7.66□□□□□ -1.18
RFX1P22670 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.66□□□□□ -1.18
RFX1P22670 Y_RNA.88-201ENST00000363029 99 ntBASIC7.66□□□□□ -1.18
RFX1P22670 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 ESD-201ENST00000378697 1079 ntTSL 5 BASIC7.66□□□□□ -1.18
RFX1P22670 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 SNORD116-23-201ENST00000384645 92 ntBASIC7.66□□□□□ -1.18
RFX1P22670 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
RFX1P22670 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
RFX1P22670 MIR548F1-201ENST00000408667 84 ntBASIC7.66□□□□□ -1.18
RFX1P22670 RN7SKP56-201ENST00000410513 331 ntBASIC7.66□□□□□ -1.18
RFX1P22670 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.66□□□□□ -1.18
RFX1P22670 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.66□□□□□ -1.18
RFX1P22670 AC134879.1-201ENST00000426062 394 ntBASIC7.66□□□□□ -1.18
RFX1P22670 ISCA1P1-201ENST00000426679 387 ntBASIC7.66□□□□□ -1.18
RFX1P22670 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC7.66□□□□□ -1.18
RFX1P22670 OFD1P12Y-201ENST00000427963 1207 ntBASIC7.66□□□□□ -1.18
RFX1P22670 DPPA2P1-201ENST00000428060 556 ntBASIC7.66□□□□□ -1.18
RFX1P22670 AL358876.1-201ENST00000453364 1075 ntBASIC7.66□□□□□ -1.18
RFX1P22670 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 AC027673.1-201ENST00000456245 405 ntBASIC7.66□□□□□ -1.18
RFX1P22670 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.66□□□□□ -1.18
RFX1P22670 RN7SL392P-201ENST00000473024 299 ntBASIC7.66□□□□□ -1.18
RFX1P22670 RPS16P9-201ENST00000477220 427 ntBASIC7.66□□□□□ -1.18
RFX1P22670 RN7SL868P-201ENST00000485915 303 ntBASIC7.66□□□□□ -1.18
RFX1P22670 RPS27P23-201ENST00000487608 251 ntBASIC7.66□□□□□ -1.18
RFX1P22670 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.66□□□□□ -1.18
RFX1P22670 AC116353.2-201ENST00000505332 712 ntBASIC7.66□□□□□ -1.18
RFX1P22670 NACAP6-201ENST00000509572 622 ntBASIC7.66□□□□□ -1.18
RFX1P22670 AC109471.1-201ENST00000511631 612 ntBASIC7.66□□□□□ -1.18
RFX1P22670 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC7.66□□□□□ -1.18
RFX1P22670 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.66□□□□□ -1.18
RFX1P22670 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC7.66□□□□□ -1.18
RFX1P22670 AC087276.1-201ENST00000529659 480 ntBASIC7.66□□□□□ -1.18
RFX1P22670 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 CBX3P7-201ENST00000532876 502 ntBASIC7.66□□□□□ -1.18
RFX1P22670 MIR4800-201ENST00000537353 80 ntBASIC7.66□□□□□ -1.18
RFX1P22670 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.66□□□□□ -1.18
RFX1P22670 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 AC004217.3-201ENST00000551552 878 ntBASIC7.66□□□□□ -1.18
RFX1P22670 GTF2IP22-201ENST00000554443 182 ntBASIC7.66□□□□□ -1.18
RFX1P22670 ZNF519P3-201ENST00000557158 1032 ntBASIC7.66□□□□□ -1.18
RFX1P22670 AL031846.1-201ENST00000560933 314 ntBASIC7.66□□□□□ -1.18
RFX1P22670 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC7.66□□□□□ -1.18
RFX1P22670 MIR4470-201ENST00000583453 72 ntBASIC7.66□□□□□ -1.18
RFX1P22670 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC7.66□□□□□ -1.18
RFX1P22670 AC010487.1-201ENST00000594408 1172 ntBASIC7.66□□□□□ -1.18
RFX1P22670 AC111186.1-201ENST00000604684 130 ntBASIC7.66□□□□□ -1.18
RFX1P22670 AC211433.3-201ENST00000623770 375 ntBASIC7.66□□□□□ -1.18
RFX1P22670 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.66□□□□□ -1.18
RFX1P22670 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.66□□□□□ -1.18
RFX1P22670 LINC00561-201ENST00000565815 2738 ntBASIC7.66□□□□□ -1.18
RFX1P22670 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.66□□□□□ -1.18
RFX1P22670 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.66□□□□□ -1.18
RFX1P22670 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RFX1P22670 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
RFX1P22670 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
RFX1P22670 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RFX1P22670 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
RFX1P22670 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
RFX1P22670 RNU6-582P-201ENST00000362989 107 ntBASIC7.65□□□□□ -1.18
RFX1P22670 RNU4-81P-201ENST00000363561 144 ntBASIC7.65□□□□□ -1.18
RFX1P22670 RNA5SP172-201ENST00000365061 118 ntBASIC7.65□□□□□ -1.18
RFX1P22670 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
RFX1P22670 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms