Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC8.48□□□□□ -1.05
CSB-PGBD3P0DP91 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AC092111.2-201ENST00000611627 1414 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AC130360.1-201ENST00000425489 1117 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 FTH1P20-201ENST00000434913 548 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 FDX1P2-201ENST00000450769 375 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AC110749.1-201ENST00000462007 357 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 BZW1P2-201ENST00000473537 826 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 RNU6-1308P-201ENST00000516817 103 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AC130365.2-201ENST00000525882 1201 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AC027544.3-201ENST00000535082 757 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 ERP27-202ENST00000540097 993 ntTSL 2 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 ADI1P3-201ENST00000549509 470 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 FXNP1-201ENST00000555153 337 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AC090616.1-201ENST00000583895 447 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 OR2BH1P-201ENST00000608850 864 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AC019131.2-201ENST00000609071 870 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AP000255.1-201ENST00000610276 676 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AL158063.1-201ENST00000615349 536 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 ICE2P1-201ENST00000512800 1849 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 MTND4P23-201ENST00000447723 1363 ntBASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
CSB-PGBD3P0DP91 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC8.46□□□□□ -1.05
CSB-PGBD3P0DP91 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CSB-PGBD3P0DP91 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC8.46□□□□□ -1.05
CSB-PGBD3P0DP91 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.46□□□□□ -1.05
CSB-PGBD3P0DP91 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
CSB-PGBD3P0DP91 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CSB-PGBD3P0DP91 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC8.46□□□□□ -1.05
CSB-PGBD3P0DP91 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
CSB-PGBD3P0DP91 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 RNU6-797P-201ENST00000363101 109 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 RNA5SP27-201ENST00000363839 119 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 RNU1-46P-201ENST00000384425 164 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 HMGB3P31-201ENST00000413333 595 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 LINC01347-201ENST00000417964 355 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AL593851.1-201ENST00000426171 157 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 FO393419.3-201ENST00000428741 282 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AC015983.1-201ENST00000441577 373 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AL050341.1-201ENST00000447743 313 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 HIGD1AP16-201ENST00000450986 258 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 RN7SL177P-201ENST00000476596 299 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AC011825.1-201ENST00000484967 388 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 RN7SL561P-201ENST00000488553 281 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 RPS4XP14-201ENST00000493072 781 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 MTND6P8-201ENST00000503471 522 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 Y_RNA.667-201ENST00000516212 107 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 FAM106CP-201ENST00000582212 507 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 SLC25A36P1-201ENST00000590111 465 ntBASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms