Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SSX4O60224 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SSX4O60224 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SSX4O60224 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.12□□□□□ -1.59
SSX4O60224 GNL2P1-201ENST00000451274 2190 ntBASIC5.12□□□□□ -1.59
SSX4O60224 AC093849.1-201ENST00000563631 2209 ntBASIC5.12□□□□□ -1.59
SSX4O60224 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.12□□□□□ -1.59
SSX4O60224 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SSX4O60224 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.12□□□□□ -1.59
SSX4O60224 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SSX4O60224 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SSX4O60224 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX4O60224 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX4O60224 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX4O60224 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
SSX4O60224 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SSX4O60224 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX4O60224 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX4O60224 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX4O60224 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
SSX4O60224 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX4O60224 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSX4O60224 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX4O60224 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX4O60224 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.11□□□□□ -1.59
SSX4O60224 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX4O60224 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX4O60224 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSX4O60224 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SSX4O60224 RPS3AP2-201ENST00000407190 754 ntBASIC5.11□□□□□ -1.59
SSX4O60224 PTGES3P2-201ENST00000407942 482 ntBASIC5.11□□□□□ -1.59
SSX4O60224 RN7SKP166-201ENST00000410812 305 ntBASIC5.11□□□□□ -1.59
SSX4O60224 RPL26P37-201ENST00000411983 438 ntBASIC5.11□□□□□ -1.59
SSX4O60224 AL354890.1-201ENST00000413730 346 ntBASIC5.11□□□□□ -1.59
SSX4O60224 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX4O60224 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.11□□□□□ -1.59
SSX4O60224 MARK2P12-201ENST00000420129 585 ntBASIC5.11□□□□□ -1.59
SSX4O60224 AC019205.1-201ENST00000421830 730 ntBASIC5.11□□□□□ -1.59
SSX4O60224 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX4O60224 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSX4O60224 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.11□□□□□ -1.59
SSX4O60224 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSX4O60224 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX4O60224 AL512593.1-201ENST00000444758 779 ntBASIC5.11□□□□□ -1.59
SSX4O60224 AC006326.1-201ENST00000445465 787 ntBASIC5.11□□□□□ -1.59
SSX4O60224 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.11□□□□□ -1.59
SSX4O60224 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SSX4O60224 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX4O60224 RN7SL177P-201ENST00000476596 299 ntBASIC5.11□□□□□ -1.59
SSX4O60224 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX4O60224 AL136038.1-201ENST00000497246 351 ntBASIC5.11□□□□□ -1.59
SSX4O60224 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX4O60224 GAPDHP62-201ENST00000515313 990 ntBASIC5.11□□□□□ -1.59
SSX4O60224 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.11□□□□□ -1.59
SSX4O60224 SEPT10P1-201ENST00000517342 1162 ntBASIC5.11□□□□□ -1.59
SSX4O60224 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX4O60224 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX4O60224 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX4O60224 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.11□□□□□ -1.59
SSX4O60224 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX4O60224 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSX4O60224 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX4O60224 CR383656.14-201ENST00000551951 406 ntBASIC5.11□□□□□ -1.59
SSX4O60224 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.11□□□□□ -1.59
SSX4O60224 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX4O60224 AC141002.1-201ENST00000607025 279 ntBASIC5.11□□□□□ -1.59
SSX4O60224 AC084824.5-201ENST00000612009 413 ntBASIC5.11□□□□□ -1.59
SSX4O60224 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX4O60224 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX4O60224 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX4O60224 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX4O60224 CIR1P2-201ENST00000514821 1342 ntBASIC5.11□□□□□ -1.59
SSX4O60224 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX4O60224 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX4O60224 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSX4O60224 HSPD1P7-201ENST00000447985 1686 ntBASIC5.11□□□□□ -1.59
SSX4O60224 AC027088.4-201ENST00000611559 1947 ntBASIC5.11□□□□□ -1.59
SSX4O60224 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX4O60224 AC107021.2-201ENST00000567714 2095 ntBASIC5.11□□□□□ -1.59
SSX4O60224 AC012254.3-201ENST00000591183 2117 ntBASIC5.11□□□□□ -1.59
SSX4O60224 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX4O60224 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SSX4O60224 ABCC13-202ENST00000463099 3842 ntBASIC5.1□□□□□ -1.59
SSX4O60224 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX4O60224 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX4O60224 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.1□□□□□ -1.59
SSX4O60224 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SSX4O60224 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX4O60224 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SSX4O60224 RNA5SP91-201ENST00000390902 119 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AL096711.1-201ENST00000404780 554 ntBASIC5.1□□□□□ -1.59
SSX4O60224 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX4O60224 AC002524.1-201ENST00000411687 547 ntBASIC5.1□□□□□ -1.59
SSX4O60224 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX4O60224 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms