Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.58□□□□□ -1.52
SMAD6O43541 AP002884.5-201ENST00000595053 1132 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 IMMP1LP3-201ENST00000604197 224 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 AC013244.3-201ENST00000605614 388 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 AC135803.1-201ENST00000608748 565 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 AL122125.1-201ENST00000616999 600 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SMAD6O43541 MTND5P23-201ENST00000430812 1655 ntBASIC5.58□□□□□ -1.52
SMAD6O43541 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMAD6O43541 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.58□□□□□ -1.52
SMAD6O43541 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SMAD6O43541 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMAD6O43541 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMAD6O43541 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMAD6O43541 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMAD6O43541 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
SMAD6O43541 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMAD6O43541 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.58□□□□□ -1.52
SMAD6O43541 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.58□□□□□ -1.52
SMAD6O43541 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMAD6O43541 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.57□□□□□ -1.52
SMAD6O43541 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SMAD6O43541 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMAD6O43541 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SMAD6O43541 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.57□□□□□ -1.52
SMAD6O43541 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.57□□□□□ -1.52
SMAD6O43541 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMAD6O43541 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMAD6O43541 DNM1P47-203ENST00000571780 12667 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 AL353796.1-201ENST00000561542 3241 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMAD6O43541 RNA5SP335-201ENST00000363817 110 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMAD6O43541 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.57□□□□□ -1.52
SMAD6O43541 RNU6-171P-201ENST00000384354 107 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 MIR137-201ENST00000385223 102 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SMAD6O43541 AF228730.1-201ENST00000397972 663 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 AL390774.1-201ENST00000411924 246 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 BMS1P13-201ENST00000417301 885 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 MARK2P12-201ENST00000420129 585 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMAD6O43541 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.57□□□□□ -1.52
SMAD6O43541 CR848007.2-201ENST00000424918 787 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.57□□□□□ -1.52
SMAD6O43541 CYCSP6-201ENST00000434498 302 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.57□□□□□ -1.52
SMAD6O43541 TPTE2P3-201ENST00000441562 1189 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.57□□□□□ -1.52
SMAD6O43541 RPS15AP29-201ENST00000445539 400 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 RPS23P9-201ENST00000448848 438 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.57□□□□□ -1.52
SMAD6O43541 AC239798.3-201ENST00000454459 408 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 AZGP1P2-201ENST00000454506 345 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 SNORD125-201ENST00000459538 96 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.57□□□□□ -1.52
SMAD6O43541 LARP7P4-201ENST00000481075 878 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 RPS4XP1-201ENST00000482189 787 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 AC105233.1-201ENST00000498840 781 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 AC016550.1-201ENST00000505348 785 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 MTND2P38-201ENST00000522536 667 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.57□□□□□ -1.52
SMAD6O43541 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.57□□□□□ -1.52
SMAD6O43541 MTND1P24-201ENST00000552175 861 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.57□□□□□ -1.52
SMAD6O43541 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SMAD6O43541 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SMAD6O43541 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.57□□□□□ -1.52
SMAD6O43541 AC040174.2-201ENST00000602701 465 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.57□□□□□ -1.52
SMAD6O43541 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.57□□□□□ -1.52
SMAD6O43541 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.57□□□□□ -1.52
SMAD6O43541 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SMAD6O43541 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.57□□□□□ -1.52
SMAD6O43541 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SMAD6O43541 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMAD6O43541 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.57□□□□□ -1.52
SMAD6O43541 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SMAD6O43541 MTCO1P4-201ENST00000520516 1409 ntBASIC5.57□□□□□ -1.52
SMAD6O43541 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SMAD6O43541 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMAD6O43541 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMAD6O43541 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.56□□□□□ -1.52
SMAD6O43541 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMAD6O43541 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMAD6O43541 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SMAD6O43541 AC235565.1-201ENST00000456962 1325 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 AC019072.1-201ENST00000604535 1551 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.56□□□□□ -1.52
SMAD6O43541 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.56□□□□□ -1.52
SMAD6O43541 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMAD6O43541 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SMAD6O43541 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMAD6O43541 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMAD6O43541 MIR133B-201ENST00000362210 119 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.56□□□□□ -1.52
SMAD6O43541 RNU6-883P-201ENST00000384597 107 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 MIR1178-201ENST00000408396 91 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms