Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM1O00151 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.18□□□□□ -1.58
PDLIM1O00151 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM1O00151 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM1O00151 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM1O00151 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM1O00151 PDZK1P1-202ENST00000425209 1350 ntBASIC5.17□□□□□ -1.58
PDLIM1O00151 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM1O00151 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM1O00151 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM1O00151 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM1O00151 AC091305.2-201ENST00000624049 1576 ntBASIC5.17□□□□□ -1.58
PDLIM1O00151 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM1O00151 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM1O00151 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM1O00151 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PDLIM1O00151 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM1O00151 OR1L6-202ENST00000373684 1044 ntBASIC5.17□□□□□ -1.58
PDLIM1O00151 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
PDLIM1O00151 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.17□□□□□ -1.58
PDLIM1O00151 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM1O00151 OR7L1P-201ENST00000456181 380 ntBASIC5.17□□□□□ -1.58
PDLIM1O00151 RN7SL57P-201ENST00000493687 290 ntBASIC5.17□□□□□ -1.58
PDLIM1O00151 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM1O00151 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM1O00151 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM1O00151 AC008676.3-201ENST00000521237 435 ntBASIC5.17□□□□□ -1.58
PDLIM1O00151 PMS2P3-207ENST00000529061 717 ntBASIC5.17□□□□□ -1.58
PDLIM1O00151 HMGN2P36-201ENST00000529541 409 ntBASIC5.17□□□□□ -1.58
PDLIM1O00151 AC025423.2-201ENST00000537570 439 ntBASIC5.17□□□□□ -1.58
PDLIM1O00151 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.17□□□□□ -1.58
PDLIM1O00151 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PDLIM1O00151 AC092121.1-201ENST00000569452 202 ntBASIC5.17□□□□□ -1.58
PDLIM1O00151 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM1O00151 AL121890.2-201ENST00000617644 465 ntBASIC5.17□□□□□ -1.58
PDLIM1O00151 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM1O00151 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM1O00151 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
PDLIM1O00151 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM1O00151 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
PDLIM1O00151 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM1O00151 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM1O00151 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM1O00151 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
PDLIM1O00151 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM1O00151 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.16□□□□□ -1.58
PDLIM1O00151 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM1O00151 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.16□□□□□ -1.58
PDLIM1O00151 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM1O00151 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM1O00151 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM1O00151 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM1O00151 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM1O00151 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM1O00151 OR52B3P-201ENST00000314715 928 ntBASIC5.16□□□□□ -1.58
PDLIM1O00151 SNORD56.6-201ENST00000384569 71 ntBASIC5.16□□□□□ -1.58
PDLIM1O00151 RPL12P9-201ENST00000412942 488 ntBASIC5.16□□□□□ -1.58
PDLIM1O00151 MRPL53P1-201ENST00000414323 319 ntBASIC5.16□□□□□ -1.58
PDLIM1O00151 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM1O00151 MTND4LP21-201ENST00000415303 295 ntBASIC5.16□□□□□ -1.58
PDLIM1O00151 RPS3P2-201ENST00000421346 701 ntBASIC5.16□□□□□ -1.58
PDLIM1O00151 OR5M12P-201ENST00000423388 929 ntBASIC5.16□□□□□ -1.58
PDLIM1O00151 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM1O00151 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.16□□□□□ -1.58
PDLIM1O00151 RPS29P14-201ENST00000431518 171 ntBASIC5.16□□□□□ -1.58
PDLIM1O00151 TPTE2P1-204ENST00000435256 593 ntBASIC5.16□□□□□ -1.58
PDLIM1O00151 RPL12P11-201ENST00000439970 501 ntBASIC5.16□□□□□ -1.58
PDLIM1O00151 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.16□□□□□ -1.58
PDLIM1O00151 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM1O00151 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM1O00151 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM1O00151 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM1O00151 AP006222.1-205ENST00000450734 457 ntBASIC5.16□□□□□ -1.58
PDLIM1O00151 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM1O00151 AC073358.1-201ENST00000505671 684 ntBASIC5.16□□□□□ -1.58
PDLIM1O00151 HMGN1P9-201ENST00000515212 298 ntBASIC5.16□□□□□ -1.58
PDLIM1O00151 AF186190.1-201ENST00000517470 480 ntBASIC5.16□□□□□ -1.58
PDLIM1O00151 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM1O00151 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM1O00151 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.16□□□□□ -1.58
PDLIM1O00151 AL137072.1-201ENST00000603444 466 ntBASIC5.16□□□□□ -1.58
PDLIM1O00151 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM1O00151 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM1O00151 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM1O00151 AC037198.3-201ENST00000616754 526 ntBASIC5.16□□□□□ -1.58
PDLIM1O00151 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM1O00151 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM1O00151 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM1O00151 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM1O00151 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM1O00151 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM1O00151 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
PDLIM1O00151 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PDLIM1O00151 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM1O00151 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
PDLIM1O00151 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PDLIM1O00151 AC008079.2-201ENST00000623543 20396 ntBASIC5.15□□□□□ -1.58
PDLIM1O00151 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.15□□□□□ -1.58
PDLIM1O00151 SALL4P2-201ENST00000423288 2910 ntBASIC5.15□□□□□ -1.58
PDLIM1O00151 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms