Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AL121657.1-201ENST00000327215 531 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 RNU4-79P-201ENST00000362764 141 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 Y_RNA.160-201ENST00000363677 92 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 SNORA64.3-201ENST00000365647 134 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AC092642.1-201ENST00000392417 425 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 FDPSP5-201ENST00000399474 1057 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AC004448.2-201ENST00000422360 586 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 FTO-202ENST00000431610 707 ntTSL 3 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AC112492.2-201ENST00000432774 1030 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 PTGES3P1-201ENST00000439531 483 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 LAPTM4BP1-201ENST00000447781 690 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AC093166.3-201ENST00000448785 303 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AL121578.2-201ENST00000448797 447 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 SUMO2P7-201ENST00000511179 285 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 Vault.2-201ENST00000516519 98 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 DHFRP1-201ENST00000579682 559 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 7SK.10-201ENST00000621414 298 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AP000577.1-201ENST00000624366 878 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AC127502.3-201ENST00000636170 1206 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 MIR1910-201ENST00000636955 80 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 CASC19-274ENST00000642018 970 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 SAMMSON-227ENST00000642114 1199 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 MAPK10-357ENST00000641831 2858 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AC104162.1-201ENST00000430831 2382 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 AC110597.1-201ENST00000562669 3176 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 FANCD2P2-201ENST00000437591 1400 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 Y_RNA.138-201ENST00000363462 102 ntBASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 RNU1-65P-201ENST00000363919 148 ntBASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 RN7SKP15-201ENST00000364742 309 ntBASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 SNORA75.4-201ENST00000391278 119 ntBASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 LSM5-206ENST00000409987 504 ntTSL 5 BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 RN7SKP285-201ENST00000410137 318 ntBASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 RANP6-201ENST00000413691 644 ntBASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 AC018630.2-202ENST00000422992 927 ntBASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 AC144530.1-201ENST00000452862 555 ntBASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 RPL5P24-201ENST00000463742 885 ntBASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 AP005202.1-201ENST00000489915 867 ntBASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 GUSBP9-201ENST00000510138 584 ntBASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 LRRC34P2-201ENST00000514850 553 ntBASIC8.78□□□□□ -1
PDZRN3Q9UPQ7 RN7SKP196-201ENST00000516267 345 ntBASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms