Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AL049733.1-201ENST00000440178 603 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 PMS2P9-201ENST00000441237 515 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 Y_RNA.632-201ENST00000459189 102 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 Y_RNA.631-201ENST00000459607 101 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AC096741.1-201ENST00000472250 846 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AL163540.1-201ENST00000485382 386 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AC093809.1-201ENST00000509155 340 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 RN7SKP40-201ENST00000517211 242 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AC018638.8-201ENST00000588755 281 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AC016925.2-201ENST00000605108 242 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 C2orf27A-204ENST00000623058 969 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AC073488.3-201ENST00000631611 778 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AC087821.2-201ENST00000637086 450 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AL118496.1-201ENST00000440201 1812 ntBASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
COL25A1Q9BXS0 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 AC012078.1-201ENST00000405035 1646 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 AC012467.2-201ENST00000607783 2583 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 AC093768.1-201ENST00000505987 2173 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 NRG3-204ENST00000404576 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 CTNNA2-203ENST00000402739 3684 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 MIR365B-201ENST00000362317 111 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 RNU6-1085P-201ENST00000363576 107 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 RN7SKP107-201ENST00000364157 290 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 SPTLC1P2-201ENST00000407089 121 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 SRSF1P1-201ENST00000424058 520 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 OFD1P12Y-201ENST00000427963 1207 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 SNRPEP4-201ENST00000435815 279 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 MYL6P3-201ENST00000436904 432 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 MRPL50P4-201ENST00000446432 475 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 CBX1P2-201ENST00000453841 458 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 Y_RNA.639-201ENST00000458981 102 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 AC023598.1-201ENST00000472521 361 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 RN7SL817P-201ENST00000480777 288 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 RPS7P6-201ENST00000485777 579 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 ABCA11P-202ENST00000504019 2110 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 AC060775.1-201ENST00000518241 520 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 AC008429.2-201ENST00000523057 864 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 AC239860.2-201ENST00000525886 270 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 OSBPL9P2-201ENST00000526582 1228 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 SUGT1P3-202ENST00000604259 383 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 U1.41-201ENST00000617626 165 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 AC068880.5-201ENST00000624331 290 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 AC020951.1-201ENST00000624361 2271 ntBASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 SGK1-201ENST00000237305 2401 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
COL25A1Q9BXS0 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms