Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PHOX2BQ99453 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
PHOX2BQ99453 AL355488.2-201ENST00000609909 2850 ntBASIC7.96□□□□□ -1.13
PHOX2BQ99453 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
PHOX2BQ99453 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC7.96□□□□□ -1.13
PHOX2BQ99453 ANKRD62P1-201ENST00000434304 1623 ntBASIC7.96□□□□□ -1.13
PHOX2BQ99453 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
PHOX2BQ99453 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.96□□□□□ -1.13
PHOX2BQ99453 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.96□□□□□ -1.13
PHOX2BQ99453 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
PHOX2BQ99453 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
PHOX2BQ99453 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 SNORA33.2-201ENST00000365413 134 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PHOX2BQ99453 SNORD15A-201ENST00000384214 148 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 RNU6-1151P-201ENST00000384684 107 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 RNU6-907P-201ENST00000390924 102 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 RPS20P2-201ENST00000402520 389 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 RPL7P58-201ENST00000402913 758 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 RNU2-28P-201ENST00000410457 189 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 RNU6-1068P-201ENST00000410958 103 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 AC244157.1-201ENST00000415642 163 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PHOX2BQ99453 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 AC073900.1-201ENST00000429766 776 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 DDX11L10-201ENST00000430178 571 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 PRPF38AP1-201ENST00000451976 933 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 Y_RNA.639-201ENST00000458981 102 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 MRPS17P3-201ENST00000465453 385 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 OR7E163P-201ENST00000505943 894 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 RPL7L1P7-201ENST00000509986 724 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 AC110792.2-201ENST00000510278 224 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 RN7SKP70-201ENST00000516655 271 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 IGKV3-34-201ENST00000521692 293 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 OR5M2P-201ENST00000529003 936 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 ELOCP31-201ENST00000540463 467 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 AC023050.3-201ENST00000541142 333 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 MTCYBP13-201ENST00000578634 1093 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 AC011497.2-201ENST00000600255 639 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 AC009027.1-201ENST00000604510 479 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 AC011373.1-201ENST00000607270 237 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 MIR6778-201ENST00000617912 73 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
PHOX2BQ99453 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
PHOX2BQ99453 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PHOX2BQ99453 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PHOX2BQ99453 MFSD4BP1-201ENST00000513330 1552 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 AC108467.2-201ENST00000617640 1597 ntBASIC7.96□□□□□ -1.14
PHOX2BQ99453 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PHOX2BQ99453 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
PHOX2BQ99453 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
PHOX2BQ99453 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PHOX2BQ99453 RMST-202ENST00000541282 2099 ntTSL 2 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
PHOX2BQ99453 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PHOX2BQ99453 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.96□□□□□ -1.14
PHOX2BQ99453 AP002907.1-201ENST00000606361 1430 ntBASIC7.95□□□□□ -1.14
PHOX2BQ99453 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.95□□□□□ -1.14
PHOX2BQ99453 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
PHOX2BQ99453 AC087045.3-201ENST00000623046 2468 ntBASIC7.95□□□□□ -1.14
PHOX2BQ99453 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PHOX2BQ99453 NYAP2-201ENST00000272907 4590 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PHOX2BQ99453 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
PHOX2BQ99453 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PHOX2BQ99453 AC119744.1-201ENST00000454746 1715 ntBASIC7.95□□□□□ -1.14
PHOX2BQ99453 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
PHOX2BQ99453 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PHOX2BQ99453 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
PHOX2BQ99453 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
PHOX2BQ99453 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
PHOX2BQ99453 AC110998.1-201ENST00000519029 2053 ntBASIC7.95□□□□□ -1.14
PHOX2BQ99453 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC7.95□□□□□ -1.14
PHOX2BQ99453 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PHOX2BQ99453 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
PHOX2BQ99453 RNU6-359P-201ENST00000365466 108 ntBASIC7.95□□□□□ -1.14
PHOX2BQ99453 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
PHOX2BQ99453 RN7SKP146-201ENST00000410242 334 ntBASIC7.95□□□□□ -1.14
PHOX2BQ99453 RNU2-62P-201ENST00000410868 191 ntBASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms