Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 AC006210.2-201ENST00000367074 1545 ntBASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 ABCC13-202ENST00000463099 3842 ntBASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 AC109780.1-201ENST00000451768 1344 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 ADAM24P-201ENST00000398655 2101 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 RNA5SP90-201ENST00000364801 99 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 RNU1-74P-201ENST00000384108 171 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 EI24P3-201ENST00000399046 1062 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 U3.36-201ENST00000408418 213 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 RN7SKP278-201ENST00000410504 342 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 GPS2P1-201ENST00000411761 986 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 AL161722.2-201ENST00000434731 981 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 MTND6P5-201ENST00000448266 512 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 AURKAPS1-201ENST00000451805 1212 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 SEPT7P3-201ENST00000455017 621 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 RNU7-157P-201ENST00000459600 66 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 RN7SL708P-201ENST00000580952 299 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 AC011626.1-201ENST00000604710 562 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 AC018445.2-201ENST00000622987 260 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 AC135068.12-201ENST00000637370 931 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 AC023421.1-201ENST00000590535 1785 ntBASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ECHDC3Q96DC8 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 RNU6-673P-201ENST00000365084 104 ntBASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 RNA5SP241-201ENST00000391326 114 ntBASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 OR8V1P-201ENST00000395193 873 ntBASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 RPS27AP6-201ENST00000427962 448 ntBASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 RPL19P16-201ENST00000433839 588 ntBASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 AC009127.1-201ENST00000467090 155 ntBASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 AC004815.1-201ENST00000484185 331 ntBASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 AC011447.4-201ENST00000587562 111 ntBASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 MIR6719-201ENST00000622428 87 ntBASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ECHDC3Q96DC8 TCP11X1-202ENST00000622971 1372 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms