Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 FAM25E-202ENST00000608562 189 ntBASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 NPM1P18-201ENST00000434232 732 ntBASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 RPS12P31-201ENST00000491419 398 ntBASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 AC097486.1-201ENST00000515331 210 ntBASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 AC027369.5-201ENST00000533838 755 ntBASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 AL049872.1-201ENST00000556323 322 ntBASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 AC012618.3-205ENST00000637896 1496 ntBASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 CASC19-221ENST00000641309 1382 ntBASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 PRPF38AP1-201ENST00000451976 933 ntBASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.35□□□□□ -1.55
SHROOM3Q8TF72 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 AL133325.1-201ENST00000421090 382 ntBASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 OR52E3P-201ENST00000452083 936 ntBASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 AC093815.1-201ENST00000508637 280 ntBASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 AC079064.1-201ENST00000528365 362 ntBASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 SAMMSON-209ENST00000641222 1100 ntBASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM3Q8TF72 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.34□□□□□ -1.56
SHROOM3Q8TF72 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.34□□□□□ -1.56
SHROOM3Q8TF72 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 RNA5SP505-201ENST00000364748 108 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 SNORA48.4-201ENST00000391089 134 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 RPL34P20-201ENST00000442771 351 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 BX842559.2-201ENST00000451418 605 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AC068587.1-201ENST00000483613 781 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 RN7SL591P-201ENST00000496150 292 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 PRELID3BP5-201ENST00000508612 460 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AC134349.2-201ENST00000535136 910 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms