Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 INTS6P1-201ENST00000504674 2530 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 CYB5AP4-201ENST00000396692 399 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 MIR1182-201ENST00000408363 97 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 RPL37P18-201ENST00000411602 243 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 AC234781.4-201ENST00000419384 244 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 RPS11P7-201ENST00000442125 465 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 AC073072.2-201ENST00000447425 348 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 AC104849.1-201ENST00000462623 405 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 IGBP1P4-201ENST00000503202 879 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 CDH12P4-201ENST00000517835 295 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 CDH12P3-201ENST00000517935 295 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 CDH12P1-201ENST00000518435 295 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 AC079064.1-201ENST00000528365 362 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 BRD9P1-201ENST00000529855 560 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 AP001357.1-201ENST00000586304 1053 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 AC005252.1-201ENST00000604518 1063 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 AC073575.2-201ENST00000614212 627 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 AL353662.3-201ENST00000625131 237 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 AC097461.1-201ENST00000568928 2821 ntBASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM1Q2M3G4 MIPEPP2-201ENST00000422560 1819 ntBASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 RN7SKP95-201ENST00000362860 303 ntBASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 RNA5SP90-201ENST00000364801 99 ntBASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 AL139128.1-201ENST00000413921 941 ntBASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 RPL26P29-201ENST00000415623 438 ntBASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 OR2AM1P-201ENST00000422137 422 ntBASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 RNA5SP228-201ENST00000516232 133 ntBASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 AC130364.2-201ENST00000528639 604 ntBASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 MIR3934-201ENST00000579806 107 ntBASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 AP005432.2-201ENST00000608162 586 ntBASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 MIR7703-201ENST00000620784 77 ntBASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 AC239868.2-201ENST00000564237 4527 ntBASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.13□□□□□ -1.43
SHROOM1Q2M3G4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 SNORA70.9-201ENST00000384370 135 ntBASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 RPL31P44-201ENST00000447680 377 ntBASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 AC009963.4-201ENST00000448535 339 ntBASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 AC097484.1-201ENST00000471148 389 ntBASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 AC090142.2-201ENST00000483263 416 ntBASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 BTF3P13-201ENST00000513224 490 ntBASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 OR7H2P-201ENST00000513483 306 ntBASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 HMGN1P9-201ENST00000515212 298 ntBASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms