Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 RNA5SP90-201ENST00000364801 99 ntBASIC6.3□□□□□ -1.4
RFX7Q2KHR2 RNA5SP87-201ENST00000384155 118 ntBASIC6.3□□□□□ -1.4
RFX7Q2KHR2 MIR1182-201ENST00000408363 97 ntBASIC6.3□□□□□ -1.4
RFX7Q2KHR2 AC211486.3-201ENST00000412694 621 ntBASIC6.3□□□□□ -1.4
RFX7Q2KHR2 COX5BP7-201ENST00000414780 274 ntBASIC6.3□□□□□ -1.4
RFX7Q2KHR2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.3□□□□□ -1.4
RFX7Q2KHR2 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 PPP1R11P1-201ENST00000486095 376 ntBASIC6.3□□□□□ -1.4
RFX7Q2KHR2 RN7SKP66-201ENST00000516681 231 ntBASIC6.3□□□□□ -1.4
RFX7Q2KHR2 AC087783.2-201ENST00000605070 562 ntBASIC6.3□□□□□ -1.4
RFX7Q2KHR2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 SMG1P7-201ENST00000565246 2704 ntBASIC6.3□□□□□ -1.4
RFX7Q2KHR2 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 TRY2P-201ENST00000448860 689 ntBASIC6.29□□□□□ -1.4
RFX7Q2KHR2 RN7SKP147-201ENST00000517154 244 ntBASIC6.29□□□□□ -1.4
RFX7Q2KHR2 CDH12P4-201ENST00000517835 295 ntBASIC6.29□□□□□ -1.4
RFX7Q2KHR2 CDH12P3-201ENST00000517935 295 ntBASIC6.29□□□□□ -1.4
RFX7Q2KHR2 CDH12P1-201ENST00000518435 295 ntBASIC6.29□□□□□ -1.4
RFX7Q2KHR2 AC012400.1-201ENST00000518452 381 ntBASIC6.29□□□□□ -1.4
RFX7Q2KHR2 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 HIGD1AP5-201ENST00000529959 259 ntBASIC6.29□□□□□ -1.4
RFX7Q2KHR2 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 AC099494.2-201ENST00000623371 978 ntBASIC6.29□□□□□ -1.4
RFX7Q2KHR2 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFX7Q2KHR2 TRIM51GP-201ENST00000534741 1350 ntBASIC6.29□□□□□ -1.4
RFX7Q2KHR2 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 BX284613.1-201ENST00000452221 1641 ntBASIC6.28□□□□□ -1.4
RFX7Q2KHR2 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 RNA5SP223-201ENST00000365174 120 ntBASIC6.28□□□□□ -1.4
RFX7Q2KHR2 OR8V1P-201ENST00000395193 873 ntBASIC6.28□□□□□ -1.4
RFX7Q2KHR2 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 AL078599.1-201ENST00000402075 293 ntBASIC6.28□□□□□ -1.4
RFX7Q2KHR2 VTI1BP4-201ENST00000427516 527 ntBASIC6.28□□□□□ -1.4
RFX7Q2KHR2 AC009238.2-201ENST00000431026 355 ntBASIC6.28□□□□□ -1.4
RFX7Q2KHR2 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 AC005412.2-201ENST00000492004 341 ntBASIC6.28□□□□□ -1.4
RFX7Q2KHR2 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.28□□□□□ -1.4
RFX7Q2KHR2 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 MIR4691-201ENST00000583764 85 ntBASIC6.28□□□□□ -1.4
RFX7Q2KHR2 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 AC091953.3-201ENST00000623220 236 ntBASIC6.28□□□□□ -1.4
RFX7Q2KHR2 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 AC135068.12-201ENST00000637370 931 ntBASIC6.28□□□□□ -1.4
RFX7Q2KHR2 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.28□□□□□ -1.4
RFX7Q2KHR2 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.27□□□□□ -1.41
RFX7Q2KHR2 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFX7Q2KHR2 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
RFX7Q2KHR2 SAMMSON-210ENST00000641260 1308 ntBASIC6.27□□□□□ -1.41
RFX7Q2KHR2 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
RFX7Q2KHR2 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
RFX7Q2KHR2 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
RFX7Q2KHR2 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
RFX7Q2KHR2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.27□□□□□ -1.41
RFX7Q2KHR2 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFX7Q2KHR2 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFX7Q2KHR2 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFX7Q2KHR2 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFX7Q2KHR2 RNVU1-6-201ENST00000364688 164 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms