Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDH1Q08174 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDH1Q08174 ANP32BP3-201ENST00000559213 706 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDH1Q08174 AC006960.3-201ENST00000561845 705 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AC244034.2-201ENST00000562504 509 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AC005730.3-201ENST00000583067 366 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDH1Q08174 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDH1Q08174 EXOSC3P2-201ENST00000594464 497 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AC012065.3-201ENST00000602736 439 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AC005070.2-201ENST00000604391 260 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDH1Q08174 AC012254.5-201ENST00000623573 478 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDH1Q08174 OR52B5P-202ENST00000641118 1110 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH1Q08174 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH1Q08174 Z93929.1-201ENST00000418200 1475 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDH1Q08174 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDH1Q08174 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDH1Q08174 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDH1Q08174 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH1Q08174 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
PCDH1Q08174 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH1Q08174 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH1Q08174 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH1Q08174 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH1Q08174 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDH1Q08174 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
PCDH1Q08174 ASNSP6-201ENST00000592770 1618 ntBASIC6.76□□□□□ -1.33
PCDH1Q08174 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH1Q08174 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
PCDH1Q08174 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDH1Q08174 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDH1Q08174 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH1Q08174 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PCDH1Q08174 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH1Q08174 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH1Q08174 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDH1Q08174 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
PCDH1Q08174 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH1Q08174 ZNF733P-202ENST00000444809 1573 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDH1Q08174 AC100871.1-201ENST00000507871 1456 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PCDH1Q08174 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDH1Q08174 RNU5D-1-201ENST00000363299 116 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 RNA5SP114-201ENST00000363780 113 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH1Q08174 AC007066.1-201ENST00000392902 381 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDH1Q08174 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDH1Q08174 MTCYBP24-201ENST00000420387 1106 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 AC092647.1-201ENST00000420654 287 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 AC233728.2-201ENST00000425348 757 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 AP001324.1-201ENST00000428553 399 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDH1Q08174 FTLP17-201ENST00000432567 525 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDH1Q08174 OR13K1P-201ENST00000444577 975 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 RPL7P36-201ENST00000444633 681 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDH1Q08174 Z99127.3-201ENST00000448158 395 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH1Q08174 AL606490.1-201ENST00000452266 765 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.75□□□□□ -1.33
PCDH1Q08174 UBDP1-202ENST00000457888 382 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 AC146507.1-201ENST00000468335 354 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH1Q08174 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH1Q08174 RPL7P24-201ENST00000493052 752 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH1Q08174 AC106760.2-201ENST00000504159 619 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH1Q08174 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH1Q08174 NACAP6-201ENST00000509572 622 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
PCDH1Q08174 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH1Q08174 AC106800.2-201ENST00000514009 1103 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH1Q08174 RN7SKP11-201ENST00000517018 287 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDH1Q08174 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.75□□□□□ -1.33
PCDH1Q08174 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.75□□□□□ -1.33
PCDH1Q08174 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDH1Q08174 AC009101.1-201ENST00000568135 242 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 RN7SL42P-201ENST00000579786 294 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 AC009994.1-201ENST00000606889 253 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 AC091834.1-201ENST00000614543 472 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 RN7SL126P-201ENST00000616400 299 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 AC104260.1-201ENST00000616660 539 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 AC018816.2-201ENST00000621460 353 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 AC073348.1-201ENST00000623002 331 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 AP005264.7-201ENST00000625003 745 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 MTND1P37-201ENST00000636562 264 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 AL596275.2-208ENST00000641192 594 ntBASIC6.75□□□□□ -1.33
PCDH1Q08174 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms