Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 AC104333.2-201ENST00000422630 192 ntBASIC5.04□□□□□ -1.6
CHRNB3Q05901 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 NPM1P19-201ENST00000450070 712 ntBASIC5.04□□□□□ -1.6
CHRNB3Q05901 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNB3Q05901 RPL7L1P4-201ENST00000513004 707 ntBASIC5.04□□□□□ -1.6
CHRNB3Q05901 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNB3Q05901 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 AC022404.1-201ENST00000555320 273 ntBASIC5.04□□□□□ -1.6
CHRNB3Q05901 AC135626.1-201ENST00000556983 435 ntBASIC5.04□□□□□ -1.6
CHRNB3Q05901 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 RN7SL787P-201ENST00000613000 284 ntBASIC5.04□□□□□ -1.6
CHRNB3Q05901 AC087821.1-201ENST00000623639 567 ntBASIC5.04□□□□□ -1.6
CHRNB3Q05901 AL691477.1-201ENST00000624398 162 ntBASIC5.04□□□□□ -1.6
CHRNB3Q05901 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 AL049767.1-202ENST00000637826 242 ntBASIC5.04□□□□□ -1.6
CHRNB3Q05901 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNB3Q05901 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNB3Q05901 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNB3Q05901 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.04□□□□□ -1.6
CHRNB3Q05901 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNB3Q05901 AC100778.3-201ENST00000580060 1750 ntBASIC5.04□□□□□ -1.6
CHRNB3Q05901 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNB3Q05901 MTCO1P15-201ENST00000529569 1526 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNB3Q05901 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNB3Q05901 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNB3Q05901 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNB3Q05901 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNB3Q05901 AC025574.1-201ENST00000554784 1653 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CHRNB3Q05901 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNB3Q05901 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNB3Q05901 SNORA51.1-201ENST00000363243 140 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNB3Q05901 EI24P3-201ENST00000399046 1062 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 RMRPP5-201ENST00000411156 267 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNB3Q05901 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNB3Q05901 AL121776.1-201ENST00000429337 372 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 RPL12P17-201ENST00000432393 498 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 HMGB3P24-201ENST00000433260 622 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNB3Q05901 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNB3Q05901 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNB3Q05901 AC073909.1-201ENST00000447112 999 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNB3Q05901 RPS27AP2-201ENST00000457576 465 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 RPS4XP12-201ENST00000461747 709 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 RPSAP39-201ENST00000467439 883 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 AC092754.1-201ENST00000472975 479 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.03□□□□□ -1.6
CHRNB3Q05901 RN7SKP5-201ENST00000517045 272 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNB3Q05901 AC010547.6-201ENST00000571789 193 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNB3Q05901 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNB3Q05901 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
CHRNB3Q05901 AP000648.2-201ENST00000624182 404 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CHRNB3Q05901 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNB3Q05901 AP000542.2-201ENST00000623199 6179 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNB3Q05901 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNB3Q05901 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNB3Q05901 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNB3Q05901 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNB3Q05901 AC000374.1-201ENST00000434698 1745 ntBASIC5.03□□□□□ -1.6
CHRNB3Q05901 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.03□□□□□ -1.6
CHRNB3Q05901 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNB3Q05901 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNB3Q05901 SAMMSON-213ENST00000641336 1521 ntBASIC5.02□□□□□ -1.61
CHRNB3Q05901 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNB3Q05901 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNB3Q05901 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.02□□□□□ -1.61
CHRNB3Q05901 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.02□□□□□ -1.61
CHRNB3Q05901 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNB3Q05901 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNB3Q05901 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.02□□□□□ -1.61
CHRNB3Q05901 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNB3Q05901 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNB3Q05901 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNB3Q05901 DBIP1-201ENST00000401435 260 ntBASIC5.02□□□□□ -1.61
CHRNB3Q05901 AL513325.1-201ENST00000417716 1034 ntBASIC5.02□□□□□ -1.61
CHRNB3Q05901 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.02□□□□□ -1.61
CHRNB3Q05901 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.02□□□□□ -1.61
CHRNB3Q05901 AC013268.2-201ENST00000420753 337 ntBASIC5.02□□□□□ -1.61
CHRNB3Q05901 AL034379.1-201ENST00000423216 253 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms