Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.62□□□□□ -1.67
ACTBP60709 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ACTBP60709 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ACTBP60709 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ACTBP60709 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ACTBP60709 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ACTBP60709 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.61□□□□□ -1.67
ACTBP60709 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
ACTBP60709 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ACTBP60709 RNU1-150P-201ENST00000362491 162 ntBASIC4.61□□□□□ -1.67
ACTBP60709 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.61□□□□□ -1.67
ACTBP60709 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.61□□□□□ -1.67
ACTBP60709 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.61□□□□□ -1.67
ACTBP60709 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.61□□□□□ -1.67
ACTBP60709 HMGB3P9-201ENST00000441799 583 ntBASIC4.61□□□□□ -1.67
ACTBP60709 RPS17P15-201ENST00000475609 349 ntBASIC4.61□□□□□ -1.67
ACTBP60709 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.61□□□□□ -1.67
ACTBP60709 RNA5SP271-201ENST00000516700 88 ntBASIC4.61□□□□□ -1.67
ACTBP60709 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.61□□□□□ -1.67
ACTBP60709 AC005363.1-201ENST00000530779 351 ntBASIC4.61□□□□□ -1.67
ACTBP60709 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.61□□□□□ -1.67
ACTBP60709 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.61□□□□□ -1.67
ACTBP60709 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ACTBP60709 HSPE1P2-201ENST00000554777 306 ntBASIC4.61□□□□□ -1.67
ACTBP60709 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.61□□□□□ -1.67
ACTBP60709 CD24P2-201ENST00000565486 219 ntBASIC4.61□□□□□ -1.67
ACTBP60709 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.61□□□□□ -1.67
ACTBP60709 RN7SL435P-201ENST00000584418 282 ntBASIC4.61□□□□□ -1.67
ACTBP60709 AP005431.1-201ENST00000618479 319 ntBASIC4.61□□□□□ -1.67
ACTBP60709 AC022919.1-201ENST00000624979 626 ntBASIC4.61□□□□□ -1.67
ACTBP60709 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ACTBP60709 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.61□□□□□ -1.67
ACTBP60709 AL450326.2-201ENST00000421913 1962 ntBASIC4.61□□□□□ -1.67
ACTBP60709 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ACTBP60709 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ACTBP60709 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ACTBP60709 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.61□□□□□ -1.67
ACTBP60709 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
ACTBP60709 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ACTBP60709 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
ACTBP60709 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
ACTBP60709 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.61□□□□□ -1.67
ACTBP60709 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ACTBP60709 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ACTBP60709 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ACTBP60709 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ACTBP60709 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ACTBP60709 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ACTBP60709 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ACTBP60709 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ACTBP60709 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.6□□□□□ -1.67
ACTBP60709 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.6□□□□□ -1.67
ACTBP60709 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.6□□□□□ -1.67
ACTBP60709 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ACTBP60709 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.6□□□□□ -1.67
ACTBP60709 HMGB3P10-201ENST00000434734 572 ntBASIC4.6□□□□□ -1.67
ACTBP60709 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.6□□□□□ -1.67
ACTBP60709 AC006335.2-201ENST00000437993 330 ntBASIC4.6□□□□□ -1.67
ACTBP60709 NPM1P33-201ENST00000438918 872 ntBASIC4.6□□□□□ -1.67
ACTBP60709 DNAJA1P5-201ENST00000440278 943 ntBASIC4.6□□□□□ -1.67
ACTBP60709 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.6□□□□□ -1.67
ACTBP60709 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
ACTBP60709 HSPE1P22-201ENST00000456856 327 ntBASIC4.6□□□□□ -1.67
ACTBP60709 RPS3AP15-201ENST00000483874 781 ntBASIC4.6□□□□□ -1.67
ACTBP60709 NENFP3-201ENST00000503735 313 ntBASIC4.6□□□□□ -1.67
ACTBP60709 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.6□□□□□ -1.67
ACTBP60709 AC006499.4-201ENST00000510947 694 ntBASIC4.6□□□□□ -1.67
ACTBP60709 SNORA70.20-201ENST00000516848 126 ntBASIC4.6□□□□□ -1.67
ACTBP60709 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.6□□□□□ -1.67
ACTBP60709 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.6□□□□□ -1.67
ACTBP60709 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.6□□□□□ -1.67
ACTBP60709 OR11H3P-201ENST00000554547 982 ntBASIC4.6□□□□□ -1.67
ACTBP60709 AL390726.5-202ENST00000564800 256 ntBASIC4.6□□□□□ -1.67
ACTBP60709 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.6□□□□□ -1.67
ACTBP60709 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.6□□□□□ -1.67
ACTBP60709 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.6□□□□□ -1.67
ACTBP60709 AL008729.2-201ENST00000606393 473 ntBASIC4.6□□□□□ -1.67
ACTBP60709 AL096712.1-201ENST00000614561 159 ntBASIC4.6□□□□□ -1.67
ACTBP60709 BX005214.3-202ENST00000619809 325 ntBASIC4.6□□□□□ -1.67
ACTBP60709 AC135068.5-201ENST00000624197 983 ntBASIC4.6□□□□□ -1.67
ACTBP60709 AC129915.3-201ENST00000634128 948 ntBASIC4.6□□□□□ -1.67
ACTBP60709 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.6□□□□□ -1.67
ACTBP60709 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
ACTBP60709 BRAFP1-201ENST00000445336 2703 ntBASIC4.6□□□□□ -1.67
ACTBP60709 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ACTBP60709 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
ACTBP60709 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
ACTBP60709 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ACTBP60709 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ACTBP60709 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ACTBP60709 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ACTBP60709 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ACTBP60709 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.6□□□□□ -1.67
ACTBP60709 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.6□□□□□ -1.67
ACTBP60709 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
ACTBP60709 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.6□□□□□ -1.67
ACTBP60709 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms