Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC104333.2-201ENST00000422630 192 ntBASIC5.11□□□□□ -1.59
PKNOX1P55347 MTND6P12-201ENST00000428247 522 ntBASIC5.11□□□□□ -1.59
PKNOX1P55347 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.11□□□□□ -1.59
PKNOX1P55347 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.11□□□□□ -1.59
PKNOX1P55347 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.11□□□□□ -1.59
PKNOX1P55347 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.11□□□□□ -1.59
PKNOX1P55347 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.11□□□□□ -1.59
PKNOX1P55347 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.11□□□□□ -1.59
PKNOX1P55347 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.11□□□□□ -1.59
PKNOX1P55347 HMGB1P40-201ENST00000525121 540 ntBASIC5.11□□□□□ -1.59
PKNOX1P55347 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.11□□□□□ -1.59
PKNOX1P55347 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.11□□□□□ -1.59
PKNOX1P55347 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.11□□□□□ -1.59
PKNOX1P55347 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.11□□□□□ -1.59
PKNOX1P55347 AC005726.4-201ENST00000582858 458 ntBASIC5.11□□□□□ -1.59
PKNOX1P55347 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.11□□□□□ -1.59
PKNOX1P55347 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.11□□□□□ -1.59
PKNOX1P55347 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.11□□□□□ -1.59
PKNOX1P55347 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.11□□□□□ -1.59
PKNOX1P55347 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PKNOX1P55347 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PKNOX1P55347 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
PKNOX1P55347 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PKNOX1P55347 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PKNOX1P55347 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PKNOX1P55347 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.11□□□□□ -1.59
PKNOX1P55347 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PKNOX1P55347 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.1□□□□□ -1.59
PKNOX1P55347 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
PKNOX1P55347 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.1□□□□□ -1.59
PKNOX1P55347 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.1□□□□□ -1.59
PKNOX1P55347 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.1□□□□□ -1.59
PKNOX1P55347 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PKNOX1P55347 RNU1-74P-201ENST00000384108 171 ntBASIC5.1□□□□□ -1.59
PKNOX1P55347 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PKNOX1P55347 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PKNOX1P55347 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.1□□□□□ -1.59
PKNOX1P55347 GABARAPL3-201ENST00000412799 354 ntBASIC5.1□□□□□ -1.59
PKNOX1P55347 AC007738.1-201ENST00000413892 348 ntBASIC5.1□□□□□ -1.59
PKNOX1P55347 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.1□□□□□ -1.59
PKNOX1P55347 MIPEPP2-201ENST00000422560 1819 ntBASIC5.1□□□□□ -1.59
PKNOX1P55347 NAP1L4P2-201ENST00000425958 899 ntBASIC5.1□□□□□ -1.59
PKNOX1P55347 NANOGP4-201ENST00000427230 913 ntBASIC5.1□□□□□ -1.59
PKNOX1P55347 DSTNP5-201ENST00000427921 523 ntBASIC5.1□□□□□ -1.59
PKNOX1P55347 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.1□□□□□ -1.59
PKNOX1P55347 RPL23AP19-201ENST00000436229 369 ntBASIC5.1□□□□□ -1.59
PKNOX1P55347 SSXP3-201ENST00000442971 1300 ntBASIC5.1□□□□□ -1.59
PKNOX1P55347 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.1□□□□□ -1.59
PKNOX1P55347 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.1□□□□□ -1.59
PKNOX1P55347 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.1□□□□□ -1.59
PKNOX1P55347 RN7SL741P-201ENST00000482473 289 ntBASIC5.1□□□□□ -1.59
PKNOX1P55347 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.1□□□□□ -1.59
PKNOX1P55347 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PKNOX1P55347 AC068993.1-201ENST00000546724 589 ntBASIC5.1□□□□□ -1.59
PKNOX1P55347 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PKNOX1P55347 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.1□□□□□ -1.59
PKNOX1P55347 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.1□□□□□ -1.59
PKNOX1P55347 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.1□□□□□ -1.59
PKNOX1P55347 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PKNOX1P55347 AC008814.1-201ENST00000603797 406 ntBASIC5.1□□□□□ -1.59
PKNOX1P55347 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.1□□□□□ -1.59
PKNOX1P55347 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PKNOX1P55347 AC037198.3-201ENST00000616754 526 ntBASIC5.1□□□□□ -1.59
PKNOX1P55347 SAMMSON-213ENST00000641336 1521 ntBASIC5.1□□□□□ -1.59
PKNOX1P55347 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.1□□□□□ -1.59
PKNOX1P55347 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PKNOX1P55347 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PKNOX1P55347 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PKNOX1P55347 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
PKNOX1P55347 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PKNOX1P55347 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
PKNOX1P55347 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PKNOX1P55347 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
PKNOX1P55347 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PKNOX1P55347 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.09□□□□□ -1.59
PKNOX1P55347 AC107977.1-201ENST00000355745 939 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 RNA5SP335-201ENST00000363817 110 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 RNA5SP234-201ENST00000363916 119 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 RNU1-146P-201ENST00000364015 165 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 OR8V1P-201ENST00000395193 873 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.09□□□□□ -1.59
PKNOX1P55347 AC009238.2-201ENST00000431026 355 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.09□□□□□ -1.59
PKNOX1P55347 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.09□□□□□ -1.59
PKNOX1P55347 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.09□□□□□ -1.59
PKNOX1P55347 AC104634.1-201ENST00000452720 462 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 TPT1P1-201ENST00000458495 518 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 AC108161.1-201ENST00000461060 402 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 AC090142.2-201ENST00000483263 416 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 OR11I1P-201ENST00000486033 954 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 EIF1P7-201ENST00000487533 337 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 RN7SL447P-201ENST00000494711 245 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.09□□□□□ -1.59
PKNOX1P55347 RNU6-513P-201ENST00000516104 104 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.09□□□□□ -1.59
PKNOX1P55347 AC022826.1-201ENST00000519383 805 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.09□□□□□ -1.59
PKNOX1P55347 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PKNOX1P55347 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PKNOX1P55347 AC234775.3-201ENST00000564612 656 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms