Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CASP4P49662 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CASP4P49662 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CASP4P49662 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CASP4P49662 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CASP4P49662 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CASP4P49662 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CASP4P49662 AC004817.4-201ENST00000602396 3625 ntBASIC5.66□□□□□ -1.5
CASP4P49662 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.65□□□□□ -1.5
CASP4P49662 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.65□□□□□ -1.5
CASP4P49662 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CASP4P49662 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CASP4P49662 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CASP4P49662 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CASP4P49662 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CASP4P49662 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
CASP4P49662 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CASP4P49662 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CASP4P49662 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CASP4P49662 RNA5SP223-201ENST00000365174 120 ntBASIC5.65□□□□□ -1.5
CASP4P49662 MIR1182-201ENST00000408363 97 ntBASIC5.65□□□□□ -1.5
CASP4P49662 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CASP4P49662 GTF3AP1-201ENST00000416942 1004 ntBASIC5.65□□□□□ -1.5
CASP4P49662 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.65□□□□□ -1.5
CASP4P49662 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.65□□□□□ -1.5
CASP4P49662 AL161722.2-201ENST00000434731 981 ntBASIC5.65□□□□□ -1.5
CASP4P49662 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.65□□□□□ -1.5
CASP4P49662 GAPDHP58-201ENST00000438477 1006 ntBASIC5.65□□□□□ -1.5
CASP4P49662 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.65□□□□□ -1.5
CASP4P49662 AC020779.1-201ENST00000478757 796 ntBASIC5.65□□□□□ -1.5
CASP4P49662 RPL7P39-201ENST00000481157 744 ntBASIC5.65□□□□□ -1.5
CASP4P49662 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.65□□□□□ -1.5
CASP4P49662 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.65□□□□□ -1.5
CASP4P49662 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.65□□□□□ -1.5
CASP4P49662 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CASP4P49662 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.65□□□□□ -1.5
CASP4P49662 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.65□□□□□ -1.5
CASP4P49662 AC108359.1-201ENST00000616451 1211 ntBASIC5.65□□□□□ -1.5
CASP4P49662 MIR6826-201ENST00000617808 98 ntBASIC5.65□□□□□ -1.5
CASP4P49662 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.65□□□□□ -1.5
CASP4P49662 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.65□□□□□ -1.5
CASP4P49662 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CASP4P49662 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CASP4P49662 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.65□□□□□ -1.51
CASP4P49662 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CASP4P49662 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.65□□□□□ -1.51
CASP4P49662 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CASP4P49662 PROS2P-201ENST00000474651 1951 ntBASIC5.65□□□□□ -1.51
CASP4P49662 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.65□□□□□ -1.51
CASP4P49662 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CASP4P49662 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.65□□□□□ -1.51
CASP4P49662 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CASP4P49662 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CASP4P49662 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CASP4P49662 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CASP4P49662 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CASP4P49662 AC092376.2-201ENST00000622621 4116 ntBASIC5.64□□□□□ -1.51
CASP4P49662 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CASP4P49662 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CASP4P49662 AL355433.1-201ENST00000422804 300 ntBASIC5.64□□□□□ -1.51
CASP4P49662 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.64□□□□□ -1.51
CASP4P49662 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.64□□□□□ -1.51
CASP4P49662 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.64□□□□□ -1.51
CASP4P49662 RPL7AP61-201ENST00000443410 636 ntBASIC5.64□□□□□ -1.51
CASP4P49662 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CASP4P49662 RN7SL222P-201ENST00000476452 299 ntBASIC5.64□□□□□ -1.51
CASP4P49662 AC097173.1-201ENST00000505862 819 ntBASIC5.64□□□□□ -1.51
CASP4P49662 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.64□□□□□ -1.51
CASP4P49662 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.64□□□□□ -1.51
CASP4P49662 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.64□□□□□ -1.51
CASP4P49662 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CASP4P49662 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.64□□□□□ -1.51
CASP4P49662 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.64□□□□□ -1.51
CASP4P49662 BNIP3P35-201ENST00000604530 490 ntBASIC5.64□□□□□ -1.51
CASP4P49662 AC126915.2-201ENST00000610957 190 ntBASIC5.64□□□□□ -1.51
CASP4P49662 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.64□□□□□ -1.51
CASP4P49662 AL355480.1-201ENST00000629041 99 ntBASIC5.64□□□□□ -1.51
CASP4P49662 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.64□□□□□ -1.51
CASP4P49662 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CASP4P49662 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CASP4P49662 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CASP4P49662 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CASP4P49662 TRIM51GP-201ENST00000534741 1350 ntBASIC5.64□□□□□ -1.51
CASP4P49662 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
CASP4P49662 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.63□□□□□ -1.51
CASP4P49662 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CASP4P49662 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CASP4P49662 AP005432.1-201ENST00000580891 3485 ntBASIC5.63□□□□□ -1.51
CASP4P49662 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CASP4P49662 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CASP4P49662 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CASP4P49662 MIR600-201ENST00000385007 98 ntBASIC5.63□□□□□ -1.51
CASP4P49662 NUDT19P3-201ENST00000404698 555 ntBASIC5.63□□□□□ -1.51
CASP4P49662 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.63□□□□□ -1.51
CASP4P49662 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.63□□□□□ -1.51
CASP4P49662 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CASP4P49662 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.63□□□□□ -1.51
CASP4P49662 AURKAPS1-201ENST00000451805 1212 ntBASIC5.63□□□□□ -1.51
CASP4P49662 RN7SL172P-201ENST00000460535 303 ntBASIC5.63□□□□□ -1.51
CASP4P49662 MYL12BP2-201ENST00000503948 512 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms