Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TOP1P11387 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.19□□□□□ -1.42
TOP1P11387 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TOP1P11387 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
TOP1P11387 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TOP1P11387 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TOP1P11387 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
TOP1P11387 RPL23P2-201ENST00000320371 421 ntBASIC6.19□□□□□ -1.42
TOP1P11387 MTHFD2P5-201ENST00000320415 844 ntBASIC6.19□□□□□ -1.42
TOP1P11387 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.19□□□□□ -1.42
TOP1P11387 RNU1-19P-201ENST00000363306 165 ntBASIC6.19□□□□□ -1.42
TOP1P11387 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.19□□□□□ -1.42
TOP1P11387 AC117434.1-201ENST00000419971 836 ntBASIC6.19□□□□□ -1.42
TOP1P11387 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.19□□□□□ -1.42
TOP1P11387 TAAR4P-201ENST00000454843 1039 ntBASIC6.19□□□□□ -1.42
TOP1P11387 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
TOP1P11387 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.19□□□□□ -1.42
TOP1P11387 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.19□□□□□ -1.42
TOP1P11387 HMGN1P9-201ENST00000515212 298 ntBASIC6.19□□□□□ -1.42
TOP1P11387 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.19□□□□□ -1.42
TOP1P11387 OR4A46P-201ENST00000527255 933 ntBASIC6.19□□□□□ -1.42
TOP1P11387 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.19□□□□□ -1.42
TOP1P11387 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.19□□□□□ -1.42
TOP1P11387 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.19□□□□□ -1.42
TOP1P11387 AC007448.1-201ENST00000582714 234 ntBASIC6.19□□□□□ -1.42
TOP1P11387 AL121612.2-201ENST00000612261 482 ntBASIC6.19□□□□□ -1.42
TOP1P11387 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.19□□□□□ -1.42
TOP1P11387 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TOP1P11387 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.19□□□□□ -1.42
TOP1P11387 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TOP1P11387 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
TOP1P11387 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TOP1P11387 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.18□□□□□ -1.42
TOP1P11387 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TOP1P11387 AC079298.1-201ENST00000625026 1619 ntBASIC6.18□□□□□ -1.42
TOP1P11387 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.18□□□□□ -1.42
TOP1P11387 AC092747.4-201ENST00000620519 1861 ntBASIC6.18□□□□□ -1.42
TOP1P11387 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TOP1P11387 SNORA17.1-201ENST00000362945 126 ntBASIC6.18□□□□□ -1.42
TOP1P11387 U8.4-201ENST00000363626 134 ntBASIC6.18□□□□□ -1.42
TOP1P11387 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.18□□□□□ -1.42
TOP1P11387 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.18□□□□□ -1.42
TOP1P11387 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.18□□□□□ -1.42
TOP1P11387 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TOP1P11387 RPS18P6-201ENST00000476880 458 ntBASIC6.18□□□□□ -1.42
TOP1P11387 RPL15P21-201ENST00000495592 567 ntBASIC6.18□□□□□ -1.42
TOP1P11387 IGBP1P4-201ENST00000503202 879 ntBASIC6.18□□□□□ -1.42
TOP1P11387 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.18□□□□□ -1.42
TOP1P11387 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.18□□□□□ -1.42
TOP1P11387 AC024940.3-201ENST00000538551 316 ntBASIC6.18□□□□□ -1.42
TOP1P11387 AC051619.2-201ENST00000559063 397 ntBASIC6.18□□□□□ -1.42
TOP1P11387 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.18□□□□□ -1.42
TOP1P11387 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
TOP1P11387 AC092944.2-201ENST00000605443 889 ntBASIC6.18□□□□□ -1.42
TOP1P11387 AC073869.7-201ENST00000640874 297 ntBASIC6.18□□□□□ -1.42
TOP1P11387 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TOP1P11387 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.18□□□□□ -1.42
TOP1P11387 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.18□□□□□ -1.42
TOP1P11387 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
TOP1P11387 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
TOP1P11387 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
TOP1P11387 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
TOP1P11387 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
TOP1P11387 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
TOP1P11387 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
TOP1P11387 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.17□□□□□ -1.42
TOP1P11387 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.17□□□□□ -1.42
TOP1P11387 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TOP1P11387 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TOP1P11387 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TOP1P11387 NAMPTP1-201ENST00000440465 2514 ntBASIC6.17□□□□□ -1.42
TOP1P11387 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TOP1P11387 U3.3-201ENST00000362986 216 ntBASIC6.17□□□□□ -1.42
TOP1P11387 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TOP1P11387 AC017019.1-201ENST00000426129 261 ntBASIC6.17□□□□□ -1.42
TOP1P11387 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.17□□□□□ -1.42
TOP1P11387 BRWD1P3-201ENST00000428816 390 ntBASIC6.17□□□□□ -1.42
TOP1P11387 AC124944.2-201ENST00000429866 1242 ntBASIC6.17□□□□□ -1.42
TOP1P11387 OR5M14P-201ENST00000506803 618 ntBASIC6.17□□□□□ -1.42
TOP1P11387 AC021193.1-201ENST00000511607 420 ntBASIC6.17□□□□□ -1.42
TOP1P11387 AC134349.2-201ENST00000535136 910 ntBASIC6.17□□□□□ -1.42
TOP1P11387 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.17□□□□□ -1.42
TOP1P11387 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.17□□□□□ -1.42
TOP1P11387 AL162431.4-201ENST00000604674 411 ntBASIC6.17□□□□□ -1.42
TOP1P11387 AC211433.2-201ENST00000608433 387 ntBASIC6.17□□□□□ -1.42
TOP1P11387 MTCO1P1-201ENST00000624263 1081 ntBASIC6.17□□□□□ -1.42
TOP1P11387 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.17□□□□□ -1.42
TOP1P11387 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.17□□□□□ -1.42
TOP1P11387 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
TOP1P11387 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.17□□□□□ -1.42
TOP1P11387 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.17□□□□□ -1.42
TOP1P11387 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
TOP1P11387 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TOP1P11387 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.17□□□□□ -1.42
TOP1P11387 AL034549.2-201ENST00000618285 3373 ntBASIC6.17□□□□□ -1.42
TOP1P11387 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TOP1P11387 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TOP1P11387 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.16□□□□□ -1.42
TOP1P11387 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TOP1P11387 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms