Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ALDH1A1P00352 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ALDH1A1P00352 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ALDH1A1P00352 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ALDH1A1P00352 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
ALDH1A1P00352 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
ALDH1A1P00352 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.12
ALDH1A1P00352 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
ALDH1A1P00352 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 RN7SKP174-201ENST00000363803 330 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 SNORA4.1-201ENST00000364263 144 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 RNA5SP485-201ENST00000365053 119 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 Y_RNA.431-201ENST00000384086 102 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 AL356968.2-201ENST00000412769 1257 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 USP9YP27-201ENST00000418455 438 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 AC066692.1-201ENST00000421721 457 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 GAPDHP59-201ENST00000435908 267 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 AC002542.1-201ENST00000440683 193 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 COL11A2P1-205ENST00000441798 676 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 SNRPBP1-201ENST00000443634 282 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 RPL39P6-201ENST00000448289 150 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 CCDC11P1-201ENST00000503137 1162 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 KLRA1P-201ENST00000503499 986 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 CCDC34P1-201ENST00000507441 517 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 RNU6-943P-201ENST00000516960 98 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 RNU6-794P-201ENST00000517261 64 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 ST13P6-201ENST00000522430 1102 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 PDCD5P1-201ENST00000543528 309 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 NACA-211ENST00000548563 827 ntTSL 5 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 AC078814.3-201ENST00000553036 491 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 MT1B-202ENST00000562399 351 ntTSL 3 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 AC040162.2-201ENST00000573092 157 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 MIR3913-1-201ENST00000577744 102 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 MIR4502-201ENST00000580432 81 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 RPS11-202ENST00000594493 575 ntTSL 3 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 AL139286.1-201ENST00000604465 483 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 AC010680.4-201ENST00000605334 543 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 AL355333.1-201ENST00000605632 279 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 SNX18P10-201ENST00000625014 519 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 AC006065.6-201ENST00000625201 545 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 AL596275.2-203ENST00000641951 371 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 RARSP1-201ENST00000542842 1418 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 AC061975.5-201ENST00000584928 1441 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.02□□□□□ -1.13
ALDH1A1P00352 AC068860.1-201ENST00000623701 3736 ntBASIC8.02□□□□□ -1.13
ALDH1A1P00352 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ALDH1A1P00352 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ALDH1A1P00352 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
ALDH1A1P00352 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
ALDH1A1P00352 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms