Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AL031595.2-201ENST00000624215 19071 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SHOX2O60902 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHOX2O60902 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHOX2O60902 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHOX2O60902 RNA5SP433-201ENST00000364491 114 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.23□□□□□ -1.57
SHOX2O60902 SNORD96B-201ENST00000386148 79 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHOX2O60902 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.23□□□□□ -1.57
SHOX2O60902 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.23□□□□□ -1.57
SHOX2O60902 BX119321.1-201ENST00000428912 797 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 RPL6P30-201ENST00000443382 862 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.23□□□□□ -1.57
SHOX2O60902 RPL5P16-201ENST00000471467 790 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SHOX2O60902 AC058823.1-201ENST00000485315 474 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 RN7SL193P-201ENST00000491708 276 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 AC093890.1-201ENST00000502554 540 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 LDHAP1-201ENST00000509421 992 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 AC018797.1-201ENST00000510791 255 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHOX2O60902 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.23□□□□□ -1.57
SHOX2O60902 AL671862.1-201ENST00000515851 349 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.23□□□□□ -1.57
SHOX2O60902 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.23□□□□□ -1.57
SHOX2O60902 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.23□□□□□ -1.57
SHOX2O60902 PCNAP4-201ENST00000532690 730 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.23□□□□□ -1.57
SHOX2O60902 RPA2P1-201ENST00000556557 721 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.23□□□□□ -1.57
SHOX2O60902 AC026826.3-201ENST00000561747 158 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 AC116553.2-201ENST00000564203 463 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHOX2O60902 AC009597.2-201ENST00000604659 592 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.23□□□□□ -1.57
SHOX2O60902 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.23□□□□□ -1.57
SHOX2O60902 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.23□□□□□ -1.57
SHOX2O60902 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SHOX2O60902 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHOX2O60902 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHOX2O60902 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SHOX2O60902 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.23□□□□□ -1.57
SHOX2O60902 AC108751.5-201ENST00000492880 1336 ntBASIC5.23□□□□□ -1.57
SHOX2O60902 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SHOX2O60902 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHOX2O60902 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHOX2O60902 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.22□□□□□ -1.57
SHOX2O60902 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHOX2O60902 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SHOX2O60902 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SHOX2O60902 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHOX2O60902 AL390316.1-201ENST00000406279 553 ntBASIC5.22□□□□□ -1.57
SHOX2O60902 RN7SKP86-201ENST00000410454 332 ntBASIC5.22□□□□□ -1.57
SHOX2O60902 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.22□□□□□ -1.57
SHOX2O60902 Z93019.1-201ENST00000416450 973 ntBASIC5.22□□□□□ -1.57
SHOX2O60902 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.22□□□□□ -1.57
SHOX2O60902 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.22□□□□□ -1.57
SHOX2O60902 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.22□□□□□ -1.57
SHOX2O60902 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.22□□□□□ -1.57
SHOX2O60902 AC005008.1-201ENST00000456151 612 ntBASIC5.22□□□□□ -1.57
SHOX2O60902 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.22□□□□□ -1.57
SHOX2O60902 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.22□□□□□ -1.57
SHOX2O60902 AC023194.2-201ENST00000465398 406 ntBASIC5.22□□□□□ -1.57
SHOX2O60902 RN7SL817P-201ENST00000480777 288 ntBASIC5.22□□□□□ -1.57
SHOX2O60902 RPL7P51-201ENST00000490532 749 ntBASIC5.22□□□□□ -1.57
SHOX2O60902 SETP21-201ENST00000514799 892 ntBASIC5.22□□□□□ -1.57
SHOX2O60902 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.22□□□□□ -1.57
SHOX2O60902 AC011853.1-201ENST00000518911 454 ntBASIC5.22□□□□□ -1.57
SHOX2O60902 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.22□□□□□ -1.57
SHOX2O60902 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.22□□□□□ -1.57
SHOX2O60902 FAM27E4-201ENST00000605259 342 ntBASIC5.22□□□□□ -1.57
SHOX2O60902 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.22□□□□□ -1.57
SHOX2O60902 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SHOX2O60902 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
SHOX2O60902 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SHOX2O60902 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHOX2O60902 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHOX2O60902 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHOX2O60902 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHOX2O60902 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHOX2O60902 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.22□□□□□ -1.57
SHOX2O60902 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SHOX2O60902 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHOX2O60902 AC083843.2-201ENST00000568248 6253 ntBASIC5.21□□□□□ -1.58
SHOX2O60902 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHOX2O60902 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.21□□□□□ -1.58
SHOX2O60902 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.21□□□□□ -1.58
SHOX2O60902 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHOX2O60902 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHOX2O60902 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHOX2O60902 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.21□□□□□ -1.58
SHOX2O60902 MIR1275-201ENST00000408770 80 ntBASIC5.21□□□□□ -1.58
SHOX2O60902 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.21□□□□□ -1.58
SHOX2O60902 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.21□□□□□ -1.58
SHOX2O60902 BX323845.3-201ENST00000428215 527 ntBASIC5.21□□□□□ -1.58
SHOX2O60902 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.21□□□□□ -1.58
SHOX2O60902 NMNAT1P2-201ENST00000435192 860 ntBASIC5.21□□□□□ -1.58
SHOX2O60902 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.21□□□□□ -1.58
SHOX2O60902 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms