Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AP001273.1-201ENST00000624493 3152 ntBASIC5.17□□□□□ -1.58
SNX3O60493 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.17□□□□□ -1.58
SNX3O60493 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SNX3O60493 AL356317.1-201ENST00000396110 1436 ntBASIC5.17□□□□□ -1.58
SNX3O60493 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SNX3O60493 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SNX3O60493 RNA5SP131-201ENST00000365452 119 ntBASIC5.17□□□□□ -1.58
SNX3O60493 RN7SKP292-201ENST00000365522 317 ntBASIC5.17□□□□□ -1.58
SNX3O60493 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.17□□□□□ -1.58
SNX3O60493 AL672167.2-201ENST00000377164 879 ntBASIC5.17□□□□□ -1.58
SNX3O60493 OR1F12-201ENST00000402365 945 ntBASIC5.17□□□□□ -1.58
SNX3O60493 CR848007.2-201ENST00000424918 787 ntBASIC5.17□□□□□ -1.58
SNX3O60493 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.17□□□□□ -1.58
SNX3O60493 AC009238.2-201ENST00000431026 355 ntBASIC5.17□□□□□ -1.58
SNX3O60493 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX3O60493 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX3O60493 AC098847.1-201ENST00000473094 348 ntBASIC5.17□□□□□ -1.58
SNX3O60493 AC058823.1-201ENST00000485315 474 ntBASIC5.17□□□□□ -1.58
SNX3O60493 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 AC018639.1-201ENST00000492994 442 ntBASIC5.17□□□□□ -1.58
SNX3O60493 PCNAP1-201ENST00000505363 709 ntBASIC5.17□□□□□ -1.58
SNX3O60493 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX3O60493 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX3O60493 ACTR6P1-201ENST00000514311 1104 ntBASIC5.17□□□□□ -1.58
SNX3O60493 RN7SKP35-201ENST00000517210 151 ntBASIC5.17□□□□□ -1.58
SNX3O60493 AC026688.1-201ENST00000520639 1168 ntBASIC5.17□□□□□ -1.58
SNX3O60493 AP003396.4-201ENST00000527574 265 ntBASIC5.17□□□□□ -1.58
SNX3O60493 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SNX3O60493 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX3O60493 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX3O60493 AC074029.2-201ENST00000551045 634 ntBASIC5.17□□□□□ -1.58
SNX3O60493 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SNX3O60493 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.17□□□□□ -1.58
SNX3O60493 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.17□□□□□ -1.58
SNX3O60493 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.17□□□□□ -1.58
SNX3O60493 AC009597.2-201ENST00000604659 592 ntBASIC5.17□□□□□ -1.58
SNX3O60493 MIR6885-201ENST00000612241 66 ntBASIC5.17□□□□□ -1.58
SNX3O60493 AL139407.1-201ENST00000613826 1175 ntBASIC5.17□□□□□ -1.58
SNX3O60493 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 AL162233.1-201ENST00000620014 944 ntBASIC5.17□□□□□ -1.58
SNX3O60493 LINC00216-201ENST00000623548 1126 ntBASIC5.17□□□□□ -1.58
SNX3O60493 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 LINC01963-201ENST00000562038 3148 ntBASIC5.17□□□□□ -1.58
SNX3O60493 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SNX3O60493 AC019072.1-201ENST00000604535 1551 ntBASIC5.16□□□□□ -1.58
SNX3O60493 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SNX3O60493 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.16□□□□□ -1.58
SNX3O60493 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SNX3O60493 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SNX3O60493 MTND5P23-201ENST00000430812 1655 ntBASIC5.16□□□□□ -1.58
SNX3O60493 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
SNX3O60493 RN7SKP257-201ENST00000364525 309 ntBASIC5.16□□□□□ -1.58
SNX3O60493 RN7SKP6-201ENST00000364795 319 ntBASIC5.16□□□□□ -1.58
SNX3O60493 YWHAZP6-201ENST00000399764 738 ntBASIC5.16□□□□□ -1.58
SNX3O60493 AL035079.1-201ENST00000405210 287 ntBASIC5.16□□□□□ -1.58
SNX3O60493 USP9YP19-201ENST00000412165 485 ntBASIC5.16□□□□□ -1.58
SNX3O60493 TMBIM7P-201ENST00000418074 855 ntBASIC5.16□□□□□ -1.58
SNX3O60493 OR6C64P-201ENST00000419708 825 ntBASIC5.16□□□□□ -1.58
SNX3O60493 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.16□□□□□ -1.58
SNX3O60493 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.16□□□□□ -1.58
SNX3O60493 ARL5AP3-201ENST00000439327 386 ntBASIC5.16□□□□□ -1.58
SNX3O60493 MTCO3P43-201ENST00000440974 771 ntBASIC5.16□□□□□ -1.58
SNX3O60493 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.16□□□□□ -1.58
SNX3O60493 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.16□□□□□ -1.58
SNX3O60493 HMGB1P7-201ENST00000450921 612 ntBASIC5.16□□□□□ -1.58
SNX3O60493 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SNX3O60493 AC011225.1-201ENST00000457751 369 ntBASIC5.16□□□□□ -1.58
SNX3O60493 CYCSP34-201ENST00000458172 304 ntBASIC5.16□□□□□ -1.58
SNX3O60493 AC079168.1-201ENST00000458741 345 ntBASIC5.16□□□□□ -1.58
SNX3O60493 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.16□□□□□ -1.58
SNX3O60493 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.16□□□□□ -1.58
SNX3O60493 AC005412.2-201ENST00000492004 341 ntBASIC5.16□□□□□ -1.58
SNX3O60493 RN7SL591P-201ENST00000496150 292 ntBASIC5.16□□□□□ -1.58
SNX3O60493 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.16□□□□□ -1.58
SNX3O60493 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.16□□□□□ -1.58
SNX3O60493 AC093325.1-201ENST00000508378 326 ntBASIC5.16□□□□□ -1.58
SNX3O60493 RNA5SP249-201ENST00000516127 99 ntBASIC5.16□□□□□ -1.58
SNX3O60493 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.16□□□□□ -1.58
SNX3O60493 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.16□□□□□ -1.58
SNX3O60493 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.16□□□□□ -1.58
SNX3O60493 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNX3O60493 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.16□□□□□ -1.58
SNX3O60493 AC073592.7-201ENST00000623659 507 ntBASIC5.16□□□□□ -1.58
SNX3O60493 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.16□□□□□ -1.58
SNX3O60493 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms