Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.36□□□□□ -1.55
RIPK2O43353 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RIPK2O43353 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.36□□□□□ -1.55
RIPK2O43353 FAM183DP-201ENST00000421987 399 ntBASIC5.36□□□□□ -1.55
RIPK2O43353 AL133173.1-201ENST00000423458 397 ntBASIC5.36□□□□□ -1.55
RIPK2O43353 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.36□□□□□ -1.55
RIPK2O43353 MTND4LP13-201ENST00000425022 298 ntBASIC5.36□□□□□ -1.55
RIPK2O43353 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.36□□□□□ -1.55
RIPK2O43353 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.36□□□□□ -1.55
RIPK2O43353 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.36□□□□□ -1.55
RIPK2O43353 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.36□□□□□ -1.55
RIPK2O43353 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.36□□□□□ -1.55
RIPK2O43353 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.36□□□□□ -1.55
RIPK2O43353 AC022431.1-201ENST00000450941 438 ntBASIC5.36□□□□□ -1.55
RIPK2O43353 AC079168.1-201ENST00000458741 345 ntBASIC5.36□□□□□ -1.55
RIPK2O43353 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.36□□□□□ -1.55
RIPK2O43353 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.36□□□□□ -1.55
RIPK2O43353 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.36□□□□□ -1.55
RIPK2O43353 AC068993.1-201ENST00000546724 589 ntBASIC5.36□□□□□ -1.55
RIPK2O43353 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
RIPK2O43353 RN7SL708P-201ENST00000580952 299 ntBASIC5.36□□□□□ -1.55
RIPK2O43353 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.36□□□□□ -1.55
RIPK2O43353 AC009597.2-201ENST00000604659 592 ntBASIC5.36□□□□□ -1.55
RIPK2O43353 AC018695.5-201ENST00000605872 315 ntBASIC5.36□□□□□ -1.55
RIPK2O43353 AC108359.1-201ENST00000616451 1211 ntBASIC5.36□□□□□ -1.55
RIPK2O43353 AC015914.2-201ENST00000618167 288 ntBASIC5.36□□□□□ -1.55
RIPK2O43353 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RIPK2O43353 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RIPK2O43353 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RIPK2O43353 AL731566.1-201ENST00000620490 1937 ntBASIC5.36□□□□□ -1.55
RIPK2O43353 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RIPK2O43353 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RIPK2O43353 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
RIPK2O43353 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.35□□□□□ -1.55
RIPK2O43353 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RIPK2O43353 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RIPK2O43353 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RIPK2O43353 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
RIPK2O43353 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.35□□□□□ -1.55
RIPK2O43353 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RIPK2O43353 TCP1P3-201ENST00000414406 1498 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.35□□□□□ -1.55
RIPK2O43353 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.35□□□□□ -1.55
RIPK2O43353 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RIPK2O43353 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RIPK2O43353 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RIPK2O43353 MIR375-201ENST00000362103 64 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 U3.32-201ENST00000408116 212 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 AC245060.4-201ENST00000413293 1121 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 SRSF1P1-201ENST00000424058 520 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 GSTM5P1-201ENST00000434751 660 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 RPL35AP21-201ENST00000437667 333 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 RPL7AP61-201ENST00000443410 636 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 AL450996.1-201ENST00000445574 1202 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
RIPK2O43353 RN7SL423P-201ENST00000486202 304 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.35□□□□□ -1.55
RIPK2O43353 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
RIPK2O43353 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.35□□□□□ -1.55
RIPK2O43353 HMGB1P44-201ENST00000508597 572 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 MRPS5P3-201ENST00000515577 166 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 SCARNA16.4-201ENST00000516956 187 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 AC105031.1-201ENST00000518550 476 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.35□□□□□ -1.55
RIPK2O43353 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.35□□□□□ -1.55
RIPK2O43353 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.35□□□□□ -1.55
RIPK2O43353 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.35□□□□□ -1.55
RIPK2O43353 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.35□□□□□ -1.55
RIPK2O43353 IGBP1P1-201ENST00000554337 1009 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.35□□□□□ -1.55
RIPK2O43353 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RIPK2O43353 AC002310.3-201ENST00000569728 723 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 AC005341.1-201ENST00000571086 708 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 MIR3154-201ENST00000577829 84 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.35□□□□□ -1.55
RIPK2O43353 AC010615.3-201ENST00000597319 394 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.35□□□□□ -1.55
RIPK2O43353 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RIPK2O43353 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.35□□□□□ -1.55
RIPK2O43353 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.35□□□□□ -1.55
RIPK2O43353 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
RIPK2O43353 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
RIPK2O43353 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.35□□□□□ -1.55
RIPK2O43353 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.35□□□□□ -1.55
RIPK2O43353 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.35□□□□□ -1.55
RIPK2O43353 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.35□□□□□ -1.55
RIPK2O43353 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RIPK2O43353 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.34□□□□□ -1.55
RIPK2O43353 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RIPK2O43353 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RIPK2O43353 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RIPK2O43353 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
RIPK2O43353 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RIPK2O43353 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.34□□□□□ -1.55
RIPK2O43353 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RIPK2O43353 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.34□□□□□ -1.55
RIPK2O43353 MIR1275-201ENST00000408770 80 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 OR2AH1P-201ENST00000425717 928 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 NPM1P22-201ENST00000427761 952 ntBASIC5.34□□□□□ -1.55
RIPK2O43353 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms