Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 AC009171.1-201ENST00000572673 266 ntBASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 AC133552.4-201ENST00000576103 676 ntBASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 AP005264.6-201ENST00000592801 414 ntTSL 2 BASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 AP000769.2-201ENST00000602344 396 ntBASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 AC009597.2-201ENST00000604659 592 ntBASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 AC005377.1-201ENST00000605126 456 ntBASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 AL031601.1-201ENST00000605702 394 ntBASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 AC012100.3-201ENST00000624738 575 ntBASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 OR8A1-204ENST00000642111 1145 ntBASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LINC01558Q9Y6Z2 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
LINC01558Q9Y6Z2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.59□□□□□ -2
LINC01558Q9Y6Z2 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
LINC01558Q9Y6Z2 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
LINC01558Q9Y6Z2 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC010300.1-201ENST00000600671 5134 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC068446.1-201ENST00000556425 1549 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AL049555.1-201ENST00000562834 1933 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 OR4L1-201ENST00000315683 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 MIR423-201ENST00000362201 94 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 RN7SKP75-201ENST00000363070 296 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 RNA5SP322-201ENST00000363617 119 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 SNORA30B-201ENST00000365319 129 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AL078604.1-201ENST00000404609 466 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 VN1R8P-201ENST00000407739 893 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC092647.1-201ENST00000420654 287 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 RPL7P53-201ENST00000421245 739 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 OR2AM1P-201ENST00000422137 422 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 BMS1P19-201ENST00000433925 393 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AL161722.2-201ENST00000434731 981 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AP000936.3-201ENST00000438127 255 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AL391987.1-201ENST00000441025 200 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 UBQLN1P1-207ENST00000441056 1169 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 RPL5P7-201ENST00000444235 813 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 MTND2P25-201ENST00000449028 610 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 EIF4E2P2-201ENST00000492033 736 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC095052.1-201ENST00000509955 863 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 SNX18P25-201ENST00000510539 758 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC016559.1-201ENST00000511420 199 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 USP9YP5-201ENST00000511770 630 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 RNA5SP418-201ENST00000515951 117 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 CASC11-203ENST00000519071 791 ntTSL 3 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC026688.1-201ENST00000520639 1168 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC090151.1-201ENST00000520784 730 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 DUX4L52-201ENST00000549363 777 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 CIPC-206ENST00000555611 599 ntTSL 4 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 HNRNPCP4-201ENST00000571636 900 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 AC015674.1-201ENST00000578482 267 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 RN7SL321P-201ENST00000581742 299 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 RN7SL356P-201ENST00000582228 248 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 RN7SL405P-201ENST00000582502 289 ntBASIC2.58□□□□□ -2
LINC01558Q9Y6Z2 RPL7AP66-201ENST00000588490 801 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms