Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AL355834.1-201ENST00000556602 3965 ntBASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 AC007559.1-201ENST00000428736 355 ntBASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 IGHV5-78-201ENST00000450948 295 ntBASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 AC020779.1-201ENST00000478757 796 ntBASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 AC005412.2-201ENST00000492004 341 ntBASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 IGKV1-32-201ENST00000519290 311 ntBASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 AL109618.2-201ENST00000605527 211 ntBASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 AC000095.2-202ENST00000637415 154 ntBASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 MAPK6PS2-201ENST00000379571 2060 ntBASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 AC007998.4-201ENST00000612496 2533 ntBASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 FHIT-201ENST00000341848 174 ntTSL 3 BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 RNA5SP113-201ENST00000410486 84 ntBASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHANK2Q9UPX8 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 AC092681.1-201ENST00000297369 291 ntBASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 HMGB3P7-201ENST00000400214 611 ntBASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 RN7SKP17-201ENST00000411242 351 ntBASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 AC004690.1-201ENST00000418216 328 ntBASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 AC016772.1-201ENST00000444170 1261 ntBASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 RPL36AP15-201ENST00000444514 266 ntBASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 MRPS33P2-201ENST00000507850 322 ntBASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 AC093824.1-201ENST00000508796 343 ntBASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 AP002981.1-201ENST00000517692 975 ntBASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 BNIP3P5-201ENST00000562290 498 ntBASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 AC233699.1-201ENST00000569955 1168 ntBASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 MIR3667-201ENST00000581025 74 ntBASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 BNIP3P35-201ENST00000604530 490 ntBASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHANK2Q9UPX8 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 FAM3C2-201ENST00000312214 681 ntBASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 AC010350.1-201ENST00000504908 231 ntBASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 GAPDHP56-201ENST00000506031 988 ntBASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 NMNAT1P1-201ENST00000554095 876 ntBASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 RN7SL690P-201ENST00000582087 240 ntBASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 BNIP3P33-201ENST00000598912 569 ntBASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 RPL26P30-202ENST00000602923 645 ntBASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 AL391358.1-201ENST00000605342 190 ntBASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
SHANK2Q9UPX8 AC138907.8-201ENST00000623981 2256 ntBASIC7.65□□□□□ -1.18
SHANK2Q9UPX8 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.65□□□□□ -1.18
SHANK2Q9UPX8 SDAD1P1-202ENST00000524156 2051 ntBASIC7.65□□□□□ -1.18
SHANK2Q9UPX8 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SHANK2Q9UPX8 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SHANK2Q9UPX8 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SHANK2Q9UPX8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SHANK2Q9UPX8 RPL10P10-201ENST00000403509 664 ntBASIC7.65□□□□□ -1.18
SHANK2Q9UPX8 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SHANK2Q9UPX8 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC7.65□□□□□ -1.18
SHANK2Q9UPX8 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC7.65□□□□□ -1.18
SHANK2Q9UPX8 RN7SL189P-201ENST00000468631 289 ntBASIC7.65□□□□□ -1.18
SHANK2Q9UPX8 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SHANK2Q9UPX8 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms