Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 HMGB3P18-201ENST00000406327 590 ntBASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 AL035422.1-201ENST00000414193 397 ntBASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 MTND3P21-201ENST00000433774 331 ntBASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 AC003989.1-201ENST00000434569 565 ntBASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 OR51P1P-201ENST00000447547 942 ntBASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 AC009963.3-201ENST00000458090 486 ntBASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 RN7SL216P-201ENST00000471607 298 ntBASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 RN7SL379P-201ENST00000479912 293 ntBASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 AP002453.2-201ENST00000533503 320 ntBASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 AP005264.7-201ENST00000625003 745 ntBASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 AC006058.1-201ENST00000568686 5067 ntBASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 AC112255.1-201ENST00000624070 2493 ntBASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 AL079343.1-201ENST00000572358 1771 ntBASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 TEX21P-201ENST00000447107 1476 ntBASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 ZNF806-201ENST00000438300 1774 ntBASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 KYNUP3-201ENST00000574386 1341 ntBASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 SNORA4.1-201ENST00000364263 144 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 RNA5SP474-201ENST00000391234 90 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AL031985.1-201ENST00000392713 418 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 NACAP7-201ENST00000407371 609 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC138393.2-201ENST00000414742 246 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 RPL34P19-201ENST00000415903 342 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AL590128.1-201ENST00000433407 286 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 MTCO3P18-201ENST00000440206 761 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC002542.1-201ENST00000440683 193 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 BMS1P10-201ENST00000443754 1120 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 MTCO2P25-201ENST00000447065 681 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 ANK3-207ENST00000460468 677 ntTSL 3 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 HMGN1P10-201ENST00000474557 553 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 RPS4XP14-201ENST00000493072 781 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 LSM3P4-201ENST00000502948 309 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 RAB11AP2-201ENST00000545905 639 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 OR4K7P-201ENST00000580232 945 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC006504.3-201ENST00000586818 523 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AL390208.1-201ENST00000605885 644 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC104184.1-201ENST00000607513 721 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC092681.3-201ENST00000609463 678 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms