Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.42□□□□□ -1.38
CD248Q9HCU0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.42□□□□□ -1.38
CD248Q9HCU0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.42□□□□□ -1.38
CD248Q9HCU0 KYNUP3-201ENST00000574386 1341 ntBASIC6.42□□□□□ -1.38
CD248Q9HCU0 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.42□□□□□ -1.38
CD248Q9HCU0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CD248Q9HCU0 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.42□□□□□ -1.38
CD248Q9HCU0 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.42□□□□□ -1.38
CD248Q9HCU0 GUCY1B2-204ENST00000531898 1979 ntBASIC6.42□□□□□ -1.38
CD248Q9HCU0 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.42□□□□□ -1.38
CD248Q9HCU0 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.42□□□□□ -1.38
CD248Q9HCU0 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CD248Q9HCU0 AL356473.1-201ENST00000406203 1408 ntBASIC6.42□□□□□ -1.38
CD248Q9HCU0 AC125238.2-201ENST00000430003 1440 ntBASIC6.42□□□□□ -1.38
CD248Q9HCU0 AC093225.1-201ENST00000506867 1408 ntBASIC6.42□□□□□ -1.38
CD248Q9HCU0 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CD248Q9HCU0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD248Q9HCU0 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 AC096921.2-201ENST00000561507 1916 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 AL133243.2-201ENST00000610331 1621 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 MIR133A2-201ENST00000347538 102 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 RNU6-792P-201ENST00000363490 107 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 SNORD51.1-201ENST00000365405 77 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 SNORD116-9-201ENST00000384000 95 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 SNORD116-3-201ENST00000384287 95 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 RNU6-729P-201ENST00000384399 107 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 SNORD116-7-201ENST00000384404 95 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 RNU1-46P-201ENST00000384425 164 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 SNORD116-5-201ENST00000384462 95 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CD248Q9HCU0 BTF3L4P1-201ENST00000413813 468 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 HMGA1P8-201ENST00000414130 321 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 PTP4A1P7-201ENST00000423476 514 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CD248Q9HCU0 AC023141.3-201ENST00000436698 278 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 AL138787.1-202ENST00000437804 898 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 MTCO1P53-201ENST00000441633 699 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 AC007000.2-201ENST00000442564 487 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 PPIAP7-201ENST00000454070 489 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 OR2AF1P-201ENST00000454899 889 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 NAP1L1P3-201ENST00000462291 880 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 AC126121.1-201ENST00000482313 553 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 AC114728.1-201ENST00000488289 483 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 AC025458.1-201ENST00000506046 166 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 MTCYBP37-201ENST00000510642 1133 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 SNORA19.3-201ENST00000516165 130 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 AP000620.1-201ENST00000527147 504 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 LRRC6P1-201ENST00000532188 885 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 OR4A40P-201ENST00000533878 948 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD248Q9HCU0 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 AC073916.1-201ENST00000545095 130 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 AC079905.1-201ENST00000549280 475 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 MIR3614-201ENST00000581261 86 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 AC103987.3-201ENST00000582071 292 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 SNX6P1-201ENST00000601728 1224 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 AC004241.3-201ENST00000611728 517 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD248Q9HCU0 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 AL096712.1-201ENST00000614561 159 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 AC105105.5-201ENST00000622635 1294 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 LINC00216-201ENST00000623548 1126 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 AC090582.1-201ENST00000636321 199 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 HSPD1P7-201ENST00000447985 1686 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.41□□□□□ -1.38
CD248Q9HCU0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CD248Q9HCU0 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CD248Q9HCU0 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD248Q9HCU0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD248Q9HCU0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD248Q9HCU0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CD248Q9HCU0 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.4□□□□□ -1.38
CD248Q9HCU0 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CD248Q9HCU0 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.4□□□□□ -1.38
CD248Q9HCU0 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms