Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 MRRFP1-201ENST00000435941 1675 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 AC112198.2-201ENST00000426589 6996 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 MIR133B-201ENST00000362210 119 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 RN7SKP124-201ENST00000364730 341 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 HSPA8P15-201ENST00000401676 786 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 AL391422.1-201ENST00000402155 436 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 AL133388.1-201ENST00000404509 287 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 GABARAPL3-201ENST00000412799 354 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 AC096644.3-201ENST00000416788 338 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 NAP1L4P2-201ENST00000425958 899 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 DNAJB5P1-201ENST00000454004 806 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 RANP1-206ENST00000455094 651 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 AC100832.1-201ENST00000471945 383 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 PPIAP19-201ENST00000486414 492 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 AC090568.1-201ENST00000509499 856 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 AC027544.3-201ENST00000535082 757 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 AC022404.1-201ENST00000555320 273 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 AC006363.1-201ENST00000603806 463 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 AC005252.1-201ENST00000604518 1063 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 AC104695.2-201ENST00000605056 775 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 MIR6861-201ENST00000618657 64 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 MIR6839-201ENST00000620425 113 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 AC093849.1-201ENST00000563631 2209 ntBASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRRC40Q9H9A6 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 AC005005.4-201ENST00000623789 16698 ntBASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 RNU6-1263P-201ENST00000384601 106 ntBASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 AL358178.1-201ENST00000407698 397 ntBASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 VN1R3-201ENST00000418822 919 ntBASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 AP000281.1-201ENST00000444036 316 ntBASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 AC058823.1-201ENST00000485315 474 ntBASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 RPL15P21-201ENST00000495592 567 ntBASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 AP001960.1-201ENST00000506494 658 ntBASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 HMGB1P40-201ENST00000525121 540 ntBASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 AC027369.5-201ENST00000533838 755 ntBASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 YWHABP2-201ENST00000540201 713 ntBASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 AC015982.1-201ENST00000608113 465 ntBASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 AC126175.1-201ENST00000617041 758 ntBASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 MIR8080-201ENST00000622224 89 ntBASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 AP001962.1-201ENST00000624114 559 ntBASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 FRG1EP-201ENST00000634469 770 ntBASIC5.4□□□□□ -1.54
LRRC40Q9H9A6 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.4□□□□□ -1.55
LRRC40Q9H9A6 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
LRRC40Q9H9A6 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
LRRC40Q9H9A6 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LRRC40Q9H9A6 CASC19-248ENST00000641674 1356 ntBASIC5.4□□□□□ -1.55
LRRC40Q9H9A6 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
LRRC40Q9H9A6 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.4□□□□□ -1.55
LRRC40Q9H9A6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 RNA5SP335-201ENST00000363817 110 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 RNA5SP178-201ENST00000410380 128 ntBASIC5.39□□□□□ -1.55
LRRC40Q9H9A6 RN7SKP293-201ENST00000411389 296 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms