Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC138701.1-201ENST00000524329 714 ntBASIC8.46□□□□□ -1.05
TOPBP1Q92547 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
TOPBP1Q92547 AC084824.1-201ENST00000550917 1005 ntBASIC8.46□□□□□ -1.05
TOPBP1Q92547 AC068831.4-201ENST00000556118 109 ntBASIC8.46□□□□□ -1.05
TOPBP1Q92547 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC8.46□□□□□ -1.05
TOPBP1Q92547 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC8.46□□□□□ -1.05
TOPBP1Q92547 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
TOPBP1Q92547 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TOPBP1Q92547 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
TOPBP1Q92547 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
TOPBP1Q92547 NACA-203ENST00000454682 6629 ntTSL 5 BASIC8.46□□□□□ -1.06
TOPBP1Q92547 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TOPBP1Q92547 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC8.46□□□□□ -1.06
TOPBP1Q92547 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
TOPBP1Q92547 AC009951.1-201ENST00000623674 2614 ntBASIC8.45□□□□□ -1.06
TOPBP1Q92547 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
TOPBP1Q92547 SNORA2.3-201ENST00000383920 135 ntBASIC8.45□□□□□ -1.06
TOPBP1Q92547 AL136116.2-201ENST00000404020 785 ntBASIC8.45□□□□□ -1.06
TOPBP1Q92547 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC8.45□□□□□ -1.06
TOPBP1Q92547 NPM1P33-201ENST00000438918 872 ntBASIC8.45□□□□□ -1.06
TOPBP1Q92547 RN7SL443P-201ENST00000464331 290 ntBASIC8.45□□□□□ -1.06
TOPBP1Q92547 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC8.45□□□□□ -1.06
TOPBP1Q92547 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.45□□□□□ -1.06
TOPBP1Q92547 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TOPBP1Q92547 AL139124.1-201ENST00000609123 421 ntBASIC8.45□□□□□ -1.06
TOPBP1Q92547 AC015712.7-201ENST00000615211 635 ntBASIC8.45□□□□□ -1.06
TOPBP1Q92547 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
TOPBP1Q92547 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
TOPBP1Q92547 AC068769.1-201ENST00000474767 2426 ntBASIC8.45□□□□□ -1.06
TOPBP1Q92547 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
TOPBP1Q92547 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TOPBP1Q92547 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TOPBP1Q92547 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TOPBP1Q92547 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TOPBP1Q92547 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TOPBP1Q92547 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TOPBP1Q92547 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.44□□□□□ -1.06
TOPBP1Q92547 IGKV7-3-201ENST00000357453 298 ntBASIC8.44□□□□□ -1.06
TOPBP1Q92547 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
TOPBP1Q92547 IGKV1OR9-1-201ENST00000424370 284 ntBASIC8.44□□□□□ -1.06
TOPBP1Q92547 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC8.44□□□□□ -1.06
TOPBP1Q92547 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC8.44□□□□□ -1.06
TOPBP1Q92547 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC8.44□□□□□ -1.06
TOPBP1Q92547 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC8.44□□□□□ -1.06
TOPBP1Q92547 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC8.44□□□□□ -1.06
TOPBP1Q92547 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC8.44□□□□□ -1.06
TOPBP1Q92547 AC019322.1-201ENST00000571869 389 ntBASIC8.44□□□□□ -1.06
TOPBP1Q92547 MIR6716-201ENST00000613413 80 ntBASIC8.44□□□□□ -1.06
TOPBP1Q92547 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
TOPBP1Q92547 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
TOPBP1Q92547 AC104964.3-201ENST00000606115 2860 ntBASIC8.44□□□□□ -1.06
TOPBP1Q92547 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC8.44□□□□□ -1.06
TOPBP1Q92547 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC8.44□□□□□ -1.06
TOPBP1Q92547 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TOPBP1Q92547 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
TOPBP1Q92547 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TOPBP1Q92547 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TOPBP1Q92547 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC8.44□□□□□ -1.06
TOPBP1Q92547 AC004158.1-201ENST00000564508 4319 ntBASIC8.44□□□□□ -1.06
TOPBP1Q92547 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.44□□□□□ -1.06
TOPBP1Q92547 RN7SL189P-201ENST00000468631 289 ntBASIC8.44□□□□□ -1.06
TOPBP1Q92547 AC109327.1-201ENST00000471666 403 ntBASIC8.44□□□□□ -1.06
TOPBP1Q92547 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC8.44□□□□□ -1.06
TOPBP1Q92547 HMGN1P9-201ENST00000515212 298 ntBASIC8.44□□□□□ -1.06
TOPBP1Q92547 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC8.44□□□□□ -1.06
TOPBP1Q92547 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TOPBP1Q92547 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC8.44□□□□□ -1.06
TOPBP1Q92547 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TOPBP1Q92547 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TOPBP1Q92547 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TOPBP1Q92547 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
TOPBP1Q92547 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC8.43□□□□□ -1.06
TOPBP1Q92547 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
TOPBP1Q92547 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TOPBP1Q92547 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
TOPBP1Q92547 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC8.43□□□□□ -1.06
TOPBP1Q92547 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC8.43□□□□□ -1.06
TOPBP1Q92547 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC8.43□□□□□ -1.06
TOPBP1Q92547 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC8.43□□□□□ -1.06
TOPBP1Q92547 AC116562.1-201ENST00000485355 781 ntBASIC8.43□□□□□ -1.06
TOPBP1Q92547 RNU2-30P-201ENST00000516209 141 ntBASIC8.43□□□□□ -1.06
TOPBP1Q92547 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC8.43□□□□□ -1.06
TOPBP1Q92547 uc_338.7-201ENST00000621834 124 ntBASIC8.43□□□□□ -1.06
TOPBP1Q92547 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC8.43□□□□□ -1.06
TOPBP1Q92547 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC8.43□□□□□ -1.06
TOPBP1Q92547 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC8.43□□□□□ -1.06
TOPBP1Q92547 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TOPBP1Q92547 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC8.43□□□□□ -1.06
TOPBP1Q92547 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
TOPBP1Q92547 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC8.43□□□□□ -1.06
TOPBP1Q92547 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
TOPBP1Q92547 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.42□□□□□ -1.06
TOPBP1Q92547 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TOPBP1Q92547 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TOPBP1Q92547 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
TOPBP1Q92547 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
TOPBP1Q92547 MIR134-201ENST00000385258 73 ntBASIC8.42□□□□□ -1.06
TOPBP1Q92547 RNA5SP397-201ENST00000391323 118 ntBASIC8.42□□□□□ -1.06
TOPBP1Q92547 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC8.42□□□□□ -1.06
TOPBP1Q92547 AC000111.2-201ENST00000448200 210 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms