Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 AC025574.1-201ENST00000554784 1653 ntBASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 RNA5SP178-201ENST00000410380 128 ntBASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 AL445213.1-201ENST00000412589 747 ntBASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 FTLP19-201ENST00000433300 394 ntBASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 AC000374.1-201ENST00000434698 1745 ntBASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 AL672138.1-201ENST00000450604 1015 ntBASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 AC114982.2-201ENST00000461396 358 ntBASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 MTATP6P1-201ENST00000514057 681 ntBASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 RNU6-1334P-201ENST00000516032 105 ntBASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 SCARNA16.4-201ENST00000516956 187 ntBASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 AC022404.1-201ENST00000555320 273 ntBASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 AL353796.1-201ENST00000561542 3241 ntBASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 AC015720.2-201ENST00000567709 334 ntBASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 AC244517.3-201ENST00000616254 1235 ntBASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTN4IP1Q8WWV3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AC019072.1-201ENST00000604535 1551 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AC023421.1-201ENST00000590535 1785 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 RNA5SP319-201ENST00000362768 119 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 SNORA17A-201ENST00000391185 133 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AC104843.2-201ENST00000427666 297 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 GAPDHP58-201ENST00000438477 1006 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AP000281.1-201ENST00000444036 316 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 DNAJB5P1-201ENST00000454004 806 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 RPS27AP2-201ENST00000457576 465 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 RN7SL51P-201ENST00000468230 285 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 CBX1P5-201ENST00000475330 559 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 RPL7P41-201ENST00000485823 957 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 RN7SL814P-201ENST00000487715 300 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AC027544.3-201ENST00000535082 757 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AC078878.1-201ENST00000539832 958 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 SNORA17.5-201ENST00000630429 132 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AC103703.1-201ENST00000634783 663 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 NEAT1-202ENST00000501122 22743 ntBASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTN4IP1Q8WWV3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms