Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 AC079168.1-201ENST00000458741 345 ntBASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 AC100832.1-201ENST00000471945 383 ntBASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 RPL7P40-201ENST00000481703 745 ntBASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 AP000859.1-201ENST00000525536 307 ntBASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 AP004607.2-201ENST00000533949 322 ntBASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 AC027544.3-201ENST00000535082 757 ntBASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 YWHABP2-201ENST00000540201 713 ntBASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 RN7SL290P-201ENST00000578661 300 ntBASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 AC005252.1-201ENST00000604518 1063 ntBASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 SNORA17.5-201ENST00000630429 132 ntBASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 AC074101.1-201ENST00000637861 241 ntBASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 NEAT1-202ENST00000501122 22743 ntBASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.22□□□□□ -1.73
TTC9CQ8N5M4 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
TTC9CQ8N5M4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
TTC9CQ8N5M4 ZNF652P1-201ENST00000442420 1309 ntBASIC4.21□□□□□ -1.73
TTC9CQ8N5M4 AL449283.1-201ENST00000602631 3403 ntBASIC4.21□□□□□ -1.73
TTC9CQ8N5M4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.21□□□□□ -1.73
TTC9CQ8N5M4 AC104623.2-202ENST00000623477 4002 ntBASIC4.21□□□□□ -1.73
TTC9CQ8N5M4 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 AP001642.1-201ENST00000624727 2117 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 SMG1P7-201ENST00000565246 2704 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 OR9G4-201ENST00000302957 984 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 RNA5SP234-201ENST00000363916 119 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 AL133388.1-201ENST00000404509 287 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 GABARAPL3-201ENST00000412799 354 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 DSTNP5-201ENST00000427921 523 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 AC090018.1-201ENST00000434369 367 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 AC092447.2-201ENST00000435487 669 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 AC012075.1-201ENST00000436549 580 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 RANP1-206ENST00000455094 651 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 RPL7P45-201ENST00000455851 743 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 RN7SL423P-201ENST00000486202 304 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 RN7SL447P-201ENST00000494711 245 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 NMNAT1P5-201ENST00000559657 841 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 AL451049.1-201ENST00000608672 497 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 MIR8080-201ENST00000622224 89 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 SAMMSON-209ENST00000641222 1100 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 CASC19-221ENST00000641309 1382 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 AC025574.1-201ENST00000554784 1653 ntBASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TTC9CQ8N5M4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 OR55B1P-203ENST00000641518 2602 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 OR56A4-201ENST00000330728 1209 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 MIR133B-201ENST00000362210 119 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 RNA5SP335-201ENST00000363817 110 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 MIR143-201ENST00000385300 106 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms