Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 SNRPGP6-201ENST00000451124 220 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 RN7SL403P-201ENST00000481783 305 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 DKK2-202ENST00000510463 908 ntTSL 3 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 RNU2-46P-201ENST00000517038 113 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 AC136424.1-201ENST00000518425 542 ntTSL 4 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 AP005639.2-201ENST00000527592 928 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 AC138123.3-201ENST00000551928 791 ntTSL 5 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 BNIP3P10-201ENST00000605360 577 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 TUG1_3.1-201ENST00000616187 237 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 SLC20A1P2-201ENST00000618036 966 ntBASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
DEPDC4Q8N2C3 ZNF658B-201ENST00000602828 3408 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 SNORA71D-201ENST00000363484 134 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 SNORD46-201ENST00000364043 104 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 Y_RNA.409-201ENST00000383990 98 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 RNU2-28P-201ENST00000410457 189 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AL035410.1-201ENST00000427409 427 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 OR7H1P-201ENST00000448965 922 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AC113208.1-201ENST00000497944 318 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AC112225.1-201ENST00000508230 297 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 GAPDHP31-201ENST00000509325 1014 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 RPL37-205ENST00000509877 637 ntTSL 5 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 snoU109.5-201ENST00000516231 132 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 Y_RNA.701-201ENST00000516812 110 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 PPP1R1AP1-201ENST00000525622 425 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AC125612.1-201ENST00000547580 377 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 ARL2BPP2-201ENST00000550907 489 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 RN7SL14P-201ENST00000579715 298 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 AC011816.2-201ENST00000607089 556 ntBASIC7.15□□□□□ -1.26
DEPDC4Q8N2C3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms