Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 NRBF2P3-201ENST00000432731 865 ntBASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 BX842559.2-201ENST00000451418 605 ntBASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 RN7SL481P-201ENST00000477764 299 ntBASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 RN7SKP276-201ENST00000516242 268 ntBASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 SOX5P1-201ENST00000524155 1127 ntBASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 MIR7853-201ENST00000584820 132 ntBASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 AC107980.1-201ENST00000558671 3355 ntBASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDC42BPAQ5VT25 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 ATP5HP3-201ENST00000396994 486 ntBASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 H3F3BP1-201ENST00000440551 403 ntBASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 RN7SL319P-201ENST00000480656 221 ntBASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 AP001521.2-201ENST00000608772 546 ntBASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 AC091932.2-201ENST00000623014 291 ntBASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 AL359955.1-201ENST00000455242 3275 ntBASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 AC004158.1-201ENST00000564508 4319 ntBASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 RNU4-64P-201ENST00000410795 131 ntBASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 RN7SKP106-201ENST00000410832 272 ntBASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 COX6CP17-201ENST00000421389 185 ntBASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 AC005154.2-201ENST00000438110 379 ntBASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 SSR3-206ENST00000476217 807 ntTSL 3 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 AC013356.1-201ENST00000489027 564 ntBASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 OR2A3P-201ENST00000493774 953 ntBASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 HPRT1P1-201ENST00000509498 657 ntBASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 OR8G5-201ENST00000524943 1041 ntBASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 AC009704.2-201ENST00000618739 483 ntBASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42BPAQ5VT25 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 ECM1P2-201ENST00000503354 1577 ntBASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 RPS3AP23-201ENST00000401762 784 ntBASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 RPL7AP49-201ENST00000429522 581 ntBASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 AL591438.1-201ENST00000433508 581 ntBASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 ENPP7P9-201ENST00000514456 627 ntBASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 AL034374.2-201ENST00000605281 548 ntBASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 AC000095.2-202ENST00000637415 154 ntBASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42BPAQ5VT25 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42BPAQ5VT25 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42BPAQ5VT25 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.59□□□□□ -1.19
CDC42BPAQ5VT25 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42BPAQ5VT25 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42BPAQ5VT25 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC7.59□□□□□ -1.19
CDC42BPAQ5VT25 RNA5SP223-201ENST00000365174 120 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms