Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 AC131971.1-201ENST00000332881 1482 ntBASIC6.32□□□□□ -1.4
RFX7Q2KHR2 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 SNORA5.1-201ENST00000384275 131 ntBASIC6.32□□□□□ -1.4
RFX7Q2KHR2 HYALP1-201ENST00000417674 1279 ntBASIC6.32□□□□□ -1.4
RFX7Q2KHR2 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 AC009127.1-201ENST00000467090 155 ntBASIC6.32□□□□□ -1.4
RFX7Q2KHR2 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 AP001922.4-201ENST00000526967 290 ntBASIC6.32□□□□□ -1.4
RFX7Q2KHR2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 AC091932.2-201ENST00000623014 291 ntBASIC6.32□□□□□ -1.4
RFX7Q2KHR2 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFX7Q2KHR2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 RPL12P9-201ENST00000412942 488 ntBASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 RPS4XP16-201ENST00000427198 791 ntBASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 BX842559.2-201ENST00000451418 605 ntBASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AL645937.3-201ENST00000453647 936 ntBASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AC002075.1-201ENST00000457396 676 ntBASIC6.31□□□□□ -1.4
RFX7Q2KHR2 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AC022884.2-201ENST00000578535 580 ntBASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 FAM25E-202ENST00000608562 189 ntBASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.31□□□□□ -1.4
RFX7Q2KHR2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 DDX39BP1-205ENST00000422507 192 ntBASIC6.31□□□□□ -1.4
RFX7Q2KHR2 RPL5P25-201ENST00000441148 775 ntBASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 RN7SL189P-201ENST00000468631 289 ntBASIC6.31□□□□□ -1.4
RFX7Q2KHR2 GTF2F2P1-201ENST00000511083 675 ntBASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AC004980.4-201ENST00000513375 203 ntBASIC6.31□□□□□ -1.4
RFX7Q2KHR2 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFX7Q2KHR2 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 CASC19-281ENST00000642118 1554 ntBASIC6.3□□□□□ -1.4
RFX7Q2KHR2 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFX7Q2KHR2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms