Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.55□□□□□ -1.84
PRKDCP78527 RN7SL188P-201ENST00000469842 285 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 AC010476.1-201ENST00000519111 851 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.55□□□□□ -1.84
PRKDCP78527 AC093014.1-201ENST00000548926 724 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 AC022146.1-201ENST00000595307 847 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 AL023881.1-201ENST00000621088 301 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 MVP-219ENST00000629059 120 ntTSL 5 BASIC3.55□□□□□ -1.84
PRKDCP78527 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
PRKDCP78527 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
PRKDCP78527 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 ZNF840P-201ENST00000504759 1996 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
PRKDCP78527 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC3.55□□□□□ -1.84
PRKDCP78527 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC3.55□□□□□ -1.84
PRKDCP78527 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC3.55□□□□□ -1.84
PRKDCP78527 RNU6-1279P-201ENST00000383917 103 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 AC069157.1-201ENST00000421749 137 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.55□□□□□ -1.84
PRKDCP78527 RN7SL98P-201ENST00000462271 300 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PRKDCP78527 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.55□□□□□ -1.84
PRKDCP78527 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.55□□□□□ -1.84
PRKDCP78527 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.55□□□□□ -1.84
PRKDCP78527 AC019322.1-201ENST00000571869 389 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.55□□□□□ -1.84
PRKDCP78527 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC3.55□□□□□ -1.84
PRKDCP78527 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
PRKDCP78527 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC3.55□□□□□ -1.84
PRKDCP78527 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.55□□□□□ -1.84
PRKDCP78527 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC3.55□□□□□ -1.84
PRKDCP78527 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC3.55□□□□□ -1.84
PRKDCP78527 SNORD8-201ENST00000363915 110 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 AL022722.2-201ENST00000402519 180 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 HYALP1-201ENST00000417674 1279 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.55□□□□□ -1.84
PRKDCP78527 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.55□□□□□ -1.84
PRKDCP78527 AL356276.2-201ENST00000435919 558 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC3.55□□□□□ -1.84
PRKDCP78527 RN7SL814P-201ENST00000487715 300 ntBASIC3.55□□□□□ -1.84
PRKDCP78527 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRKDCP78527 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PRKDCP78527 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKDCP78527 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKDCP78527 CC2D2A-202ENST00000424120 5249 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
PRKDCP78527 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PRKDCP78527 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRKDCP78527 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRKDCP78527 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC3.54□□□□□ -1.84
PRKDCP78527 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRKDCP78527 AL355834.1-201ENST00000556602 3965 ntBASIC3.54□□□□□ -1.84
PRKDCP78527 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRKDCP78527 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PRKDCP78527 AL139095.3-201ENST00000419672 1203 ntBASIC3.54□□□□□ -1.84
PRKDCP78527 AC073410.1-201ENST00000435125 589 ntBASIC3.54□□□□□ -1.84
PRKDCP78527 RPS3AP12-201ENST00000443616 753 ntBASIC3.54□□□□□ -1.84
PRKDCP78527 RPS5P7-201ENST00000456664 608 ntBASIC3.54□□□□□ -1.84
PRKDCP78527 UQCRHP4-201ENST00000471686 272 ntBASIC3.54□□□□□ -1.84
PRKDCP78527 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKDCP78527 AC068993.1-201ENST00000546724 589 ntBASIC3.54□□□□□ -1.84
PRKDCP78527 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.54□□□□□ -1.84
PRKDCP78527 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.54□□□□□ -1.84
PRKDCP78527 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.54□□□□□ -1.84
PRKDCP78527 AC096577.2-201ENST00000611455 153 ntBASIC3.54□□□□□ -1.84
PRKDCP78527 AC024023.1-201ENST00000624530 922 ntBASIC3.54□□□□□ -1.84
PRKDCP78527 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKDCP78527 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
PRKDCP78527 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKDCP78527 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC3.54□□□□□ -1.84
PRKDCP78527 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRKDCP78527 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
PRKDCP78527 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRKDCP78527 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKDCP78527 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRKDCP78527 RNU1-94P-201ENST00000362627 173 ntBASIC3.54□□□□□ -1.84
PRKDCP78527 GNG5P2-201ENST00000372054 207 ntBASIC3.54□□□□□ -1.84
PRKDCP78527 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.54□□□□□ -1.84
PRKDCP78527 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.54□□□□□ -1.84
PRKDCP78527 SLC25A18P1-201ENST00000449385 454 ntBASIC3.54□□□□□ -1.84
PRKDCP78527 AL691482.1-201ENST00000453255 87 ntBASIC3.54□□□□□ -1.84
PRKDCP78527 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.54□□□□□ -1.84
PRKDCP78527 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC3.54□□□□□ -1.84
PRKDCP78527 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRKDCP78527 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.54□□□□□ -1.84
PRKDCP78527 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKDCP78527 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKDCP78527 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKDCP78527 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms