Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
NKX6-1P78426 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
NKX6-1P78426 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NKX6-1P78426 IGKV7-3-201ENST00000357453 298 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 RNU4-40P-201ENST00000364351 143 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 RNU1-84P-201ENST00000365447 164 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.64□□□□□ -1.51
NKX6-1P78426 SNORA70H-201ENST00000383910 135 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 RNU6-413P-201ENST00000384115 107 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 SNORA70J-201ENST00000384182 135 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 OR4K6P-201ENST00000416478 897 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX6-1P78426 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.64□□□□□ -1.51
NKX6-1P78426 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.64□□□□□ -1.51
NKX6-1P78426 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX6-1P78426 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 IPPKP1-201ENST00000422501 768 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NKX6-1P78426 AC083862.1-201ENST00000427378 1242 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.64□□□□□ -1.51
NKX6-1P78426 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.64□□□□□ -1.51
NKX6-1P78426 MTND2P22-201ENST00000444325 1033 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.64□□□□□ -1.51
NKX6-1P78426 RPL23AP64-201ENST00000469465 435 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 RPL5P14-201ENST00000494197 878 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 H3F3AP3-201ENST00000497682 407 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 AC093890.1-201ENST00000502554 540 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.64□□□□□ -1.51
NKX6-1P78426 AC092593.2-201ENST00000513866 913 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 OR5H7P-201ENST00000514084 930 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 RN7SKP67-201ENST00000515905 235 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.64□□□□□ -1.51
NKX6-1P78426 IGHV3-57-201ENST00000520143 280 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 CYCSP25-201ENST00000525280 316 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 ZNF321P-202ENST00000550843 495 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 SETP1-201ENST00000556014 845 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.64□□□□□ -1.51
NKX6-1P78426 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX6-1P78426 MTCO1P40-201ENST00000574371 625 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX6-1P78426 RN7SL208P-201ENST00000577964 296 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.64□□□□□ -1.51
NKX6-1P78426 AC015688.2-201ENST00000584523 262 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.64□□□□□ -1.51
NKX6-1P78426 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX6-1P78426 AC009237.12-201ENST00000604755 742 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX6-1P78426 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX6-1P78426 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.64□□□□□ -1.51
NKX6-1P78426 AL096712.1-201ENST00000614561 159 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 AL162574.1-201ENST00000615702 950 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 AL031658.2-201ENST00000616850 651 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 VN1R7P-201ENST00000619242 903 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX6-1P78426 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX6-1P78426 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX6-1P78426 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
NKX6-1P78426 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.64□□□□□ -1.51
NKX6-1P78426 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.64□□□□□ -1.51
NKX6-1P78426 AC105114.1-201ENST00000624795 1862 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX6-1P78426 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 DDX18P4-201ENST00000511690 1966 ntBASIC5.64□□□□□ -1.51
NKX6-1P78426 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
NKX6-1P78426 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
NKX6-1P78426 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
NKX6-1P78426 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NKX6-1P78426 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NKX6-1P78426 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
NKX6-1P78426 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.63□□□□□ -1.51
NKX6-1P78426 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.63□□□□□ -1.51
NKX6-1P78426 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX6-1P78426 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.63□□□□□ -1.51
NKX6-1P78426 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.63□□□□□ -1.51
NKX6-1P78426 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms