Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RPL39P62891 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC3.56□□□□□ -1.84
RPL39P62891 AC116553.2-201ENST00000564203 463 ntBASIC3.56□□□□□ -1.84
RPL39P62891 AL390726.5-202ENST00000564800 256 ntBASIC3.56□□□□□ -1.84
RPL39P62891 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC3.56□□□□□ -1.84
RPL39P62891 MIR6806-201ENST00000622141 64 ntBASIC3.56□□□□□ -1.84
RPL39P62891 CU639417.4-201ENST00000623928 207 ntBASIC3.56□□□□□ -1.84
RPL39P62891 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.56□□□□□ -1.84
RPL39P62891 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
RPL39P62891 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC3.56□□□□□ -1.84
RPL39P62891 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC3.56□□□□□ -1.84
RPL39P62891 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RPL39P62891 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC3.56□□□□□ -1.84
RPL39P62891 MAPK10-349ENST00000641767 3661 ntBASIC3.56□□□□□ -1.84
RPL39P62891 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RPL39P62891 AC093849.1-201ENST00000563631 2209 ntBASIC3.56□□□□□ -1.84
RPL39P62891 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RPL39P62891 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RPL39P62891 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RPL39P62891 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RPL39P62891 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RPL39P62891 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RPL39P62891 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
RPL39P62891 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RPL39P62891 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC3.55□□□□□ -1.84
RPL39P62891 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPL39P62891 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RPL39P62891 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPL39P62891 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
RPL39P62891 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RPL39P62891 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPL39P62891 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPL39P62891 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RPL39P62891 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC3.55□□□□□ -1.84
RPL39P62891 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPL39P62891 SSX3-202ENST00000376893 800 ntTSL 2 BASIC3.55□□□□□ -1.84
RPL39P62891 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
RPL39P62891 TMBIM7P-201ENST00000418074 855 ntBASIC3.55□□□□□ -1.84
RPL39P62891 DPPA2P2-201ENST00000418220 897 ntBASIC3.55□□□□□ -1.84
RPL39P62891 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC3.55□□□□□ -1.84
RPL39P62891 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC3.55□□□□□ -1.84
RPL39P62891 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC3.55□□□□□ -1.84
RPL39P62891 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.55□□□□□ -1.84
RPL39P62891 ZDHHC20P1-204ENST00000435787 423 ntBASIC3.55□□□□□ -1.84
RPL39P62891 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.55□□□□□ -1.84
RPL39P62891 TXNP5-201ENST00000441043 315 ntBASIC3.55□□□□□ -1.84
RPL39P62891 AL445665.1-202ENST00000452436 324 ntBASIC3.55□□□□□ -1.84
RPL39P62891 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPL39P62891 AC012123.2-201ENST00000485809 248 ntBASIC3.55□□□□□ -1.84
RPL39P62891 AC020890.1-201ENST00000491837 504 ntBASIC3.55□□□□□ -1.84
RPL39P62891 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RPL39P62891 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC3.55□□□□□ -1.84
RPL39P62891 RNA5SP464-201ENST00000516251 108 ntBASIC3.55□□□□□ -1.84
RPL39P62891 CYCSP22-201ENST00000517555 339 ntBASIC3.55□□□□□ -1.84
RPL39P62891 AC012400.1-201ENST00000518452 381 ntBASIC3.55□□□□□ -1.84
RPL39P62891 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC3.55□□□□□ -1.84
RPL39P62891 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC3.55□□□□□ -1.84
RPL39P62891 RERGL-202ENST00000536890 367 ntTSL 3 BASIC3.55□□□□□ -1.84
RPL39P62891 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RPL39P62891 AC079600.1-201ENST00000550326 297 ntBASIC3.55□□□□□ -1.84
RPL39P62891 AC107958.1-201ENST00000556576 290 ntBASIC3.55□□□□□ -1.84
RPL39P62891 AC026826.3-201ENST00000561747 158 ntBASIC3.55□□□□□ -1.84
RPL39P62891 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RPL39P62891 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC3.55□□□□□ -1.84
RPL39P62891 AC138207.8-204ENST00000579588 527 ntBASIC3.55□□□□□ -1.84
RPL39P62891 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC3.55□□□□□ -1.84
RPL39P62891 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.55□□□□□ -1.84
RPL39P62891 HTR1DP1-201ENST00000616500 888 ntBASIC3.55□□□□□ -1.84
RPL39P62891 AL157762.1-201ENST00000619612 415 ntBASIC3.55□□□□□ -1.84
RPL39P62891 AC007683.2-201ENST00000624681 714 ntBASIC3.55□□□□□ -1.84
RPL39P62891 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC3.55□□□□□ -1.84
RPL39P62891 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RPL39P62891 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RPL39P62891 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC3.55□□□□□ -1.84
RPL39P62891 SCN1A-220ENST00000641603 12506 ntBASIC3.55□□□□□ -1.84
RPL39P62891 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RPL39P62891 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.55□□□□□ -1.84
RPL39P62891 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPL39P62891 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPL39P62891 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RPL39P62891 AL133268.1-201ENST00000405676 1401 ntBASIC3.54□□□□□ -1.84
RPL39P62891 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC3.54□□□□□ -1.84
RPL39P62891 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC3.54□□□□□ -1.84
RPL39P62891 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RPL39P62891 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
RPL39P62891 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
RPL39P62891 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RPL39P62891 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.54□□□□□ -1.84
RPL39P62891 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
RPL39P62891 RNA5SP46-201ENST00000362370 120 ntBASIC3.54□□□□□ -1.84
RPL39P62891 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RPL39P62891 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RPL39P62891 AL596448.1-201ENST00000415024 392 ntBASIC3.54□□□□□ -1.84
RPL39P62891 SLC35E1P1-201ENST00000419313 864 ntBASIC3.54□□□□□ -1.84
RPL39P62891 RPL34P3-201ENST00000421454 338 ntBASIC3.54□□□□□ -1.84
RPL39P62891 TNPO1P1-201ENST00000423641 1138 ntBASIC3.54□□□□□ -1.84
RPL39P62891 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC3.54□□□□□ -1.84
RPL39P62891 CKS1BP6-201ENST00000424932 240 ntBASIC3.54□□□□□ -1.84
RPL39P62891 DSTNP5-201ENST00000427921 523 ntBASIC3.54□□□□□ -1.84
RPL39P62891 CDY8P-201ENST00000428380 1279 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms