Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TRIM60P16-201ENST00000444048 694 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 RPL5P7-201ENST00000444235 813 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 HMGB1P7-201ENST00000450921 612 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 RANP1-206ENST00000455094 651 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AC093166.2-201ENST00000455969 1017 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.58□□□□□ -1.52
SUMO3P55854 AC073594.1-201ENST00000462065 364 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AC005165.2-201ENST00000466070 380 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AC069528.1-202ENST00000482888 637 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.58□□□□□ -1.52
SUMO3P55854 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.58□□□□□ -1.52
SUMO3P55854 AC091874.2-201ENST00000505889 720 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SUMO3P55854 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.58□□□□□ -1.52
SUMO3P55854 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.58□□□□□ -1.52
SUMO3P55854 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.58□□□□□ -1.52
SUMO3P55854 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.58□□□□□ -1.52
SUMO3P55854 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.58□□□□□ -1.52
SUMO3P55854 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.58□□□□□ -1.52
SUMO3P55854 AC008429.4-201ENST00000521201 182 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.58□□□□□ -1.52
SUMO3P55854 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.58□□□□□ -1.52
SUMO3P55854 AP001804.1-201ENST00000526868 919 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.58□□□□□ -1.52
SUMO3P55854 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.58□□□□□ -1.52
SUMO3P55854 AL358913.1-201ENST00000554342 121 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AC007494.1-201ENST00000562293 760 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.58□□□□□ -1.52
SUMO3P55854 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 MIR3154-201ENST00000577829 84 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AC016839.1-201ENST00000578162 867 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.58□□□□□ -1.52
SUMO3P55854 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.58□□□□□ -1.52
SUMO3P55854 AC008536.1-201ENST00000602872 669 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AC009948.4-201ENST00000604692 675 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AL359091.2-201ENST00000609303 556 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AC009237.15-201ENST00000610252 501 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AC022106.1-201ENST00000612834 766 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 RN7SL261P-201ENST00000613441 282 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AC048344.4-201ENST00000619744 527 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AP002782.1-201ENST00000623107 614 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AP002791.1-201ENST00000623291 381 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.58□□□□□ -1.52
SUMO3P55854 AC111152.1-202ENST00000635848 339 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 MTND2P41-201ENST00000637599 773 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SUMO3P55854 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SUMO3P55854 AL161912.4-201ENST00000623889 2468 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.58□□□□□ -1.52
SUMO3P55854 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SUMO3P55854 AC027575.3-201ENST00000583058 2747 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AC022507.1-201ENST00000548349 1505 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AC005225.5-201ENST00000623547 2225 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SUMO3P55854 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SUMO3P55854 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SUMO3P55854 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.58□□□□□ -1.52
SUMO3P55854 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SUMO3P55854 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SUMO3P55854 AC068870.3-201ENST00000625077 2536 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SUMO3P55854 AC093225.1-201ENST00000506867 1408 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.57□□□□□ -1.52
SUMO3P55854 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
SUMO3P55854 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SUMO3P55854 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SUMO3P55854 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.57□□□□□ -1.52
SUMO3P55854 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.57□□□□□ -1.52
SUMO3P55854 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
SUMO3P55854 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
SUMO3P55854 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SUMO3P55854 EIF3EP1-201ENST00000433978 1316 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SUMO3P55854 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
SUMO3P55854 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SUMO3P55854 RNU6-1339P-201ENST00000363574 91 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 RNU4-92P-201ENST00000363783 136 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 RNU105B-201ENST00000364478 208 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.57□□□□□ -1.52
SUMO3P55854 AC119751.3-201ENST00000399720 670 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 AL451046.1-201ENST00000406097 534 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 RN7SKP166-201ENST00000410812 305 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.57□□□□□ -1.52
SUMO3P55854 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.57□□□□□ -1.52
SUMO3P55854 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SUMO3P55854 C1DP1-201ENST00000426049 402 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 AP001324.1-201ENST00000428553 399 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 CDY14P-201ENST00000431260 1014 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SUMO3P55854 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.57□□□□□ -1.52
SUMO3P55854 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.57□□□□□ -1.52
SUMO3P55854 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.57□□□□□ -1.52
SUMO3P55854 CDY12P-201ENST00000440679 1015 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.57□□□□□ -1.52
SUMO3P55854 CDY13P-201ENST00000445813 1015 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 AC005002.1-201ENST00000447458 540 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 AC112492.1-201ENST00000449607 712 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 CDY23P-201ENST00000451661 1014 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 AL035690.1-201ENST00000490892 383 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 AL117692.1-201ENST00000494283 713 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms