Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK1P53667 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.64□□□□□ -1.51
LIMK1P53667 AC006272.2-201ENST00000594725 163 ntBASIC5.64□□□□□ -1.51
LIMK1P53667 AC063977.5-201ENST00000601044 974 ntBASIC5.64□□□□□ -1.51
LIMK1P53667 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.64□□□□□ -1.51
LIMK1P53667 AC004890.3-201ENST00000605566 1095 ntBASIC5.64□□□□□ -1.51
LIMK1P53667 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK1P53667 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK1P53667 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK1P53667 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK1P53667 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK1P53667 AC092451.3-201ENST00000625067 1343 ntBASIC5.64□□□□□ -1.51
LIMK1P53667 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK1P53667 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LIMK1P53667 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK1P53667 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK1P53667 HDAC1P2-201ENST00000453661 1398 ntBASIC5.64□□□□□ -1.51
LIMK1P53667 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LIMK1P53667 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.64□□□□□ -1.51
LIMK1P53667 AC009962.1-201ENST00000567327 3813 ntBASIC5.64□□□□□ -1.51
LIMK1P53667 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK1P53667 AP001541.1-201ENST00000623322 1904 ntBASIC5.64□□□□□ -1.51
LIMK1P53667 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK1P53667 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.64□□□□□ -1.51
LIMK1P53667 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.64□□□□□ -1.51
LIMK1P53667 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK1P53667 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK1P53667 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK1P53667 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK1P53667 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
LIMK1P53667 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK1P53667 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK1P53667 U3.10-201ENST00000364459 214 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK1P53667 AC016397.1-201ENST00000412463 242 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 RPL5P2-201ENST00000429598 854 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 CYCSP6-201ENST00000434498 302 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 AC073410.1-201ENST00000435125 589 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 RPS11P7-201ENST00000442125 465 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.63□□□□□ -1.51
LIMK1P53667 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.63□□□□□ -1.51
LIMK1P53667 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.63□□□□□ -1.51
LIMK1P53667 OR8G3P-201ENST00000533406 921 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 AL049779.3-201ENST00000557141 606 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.63□□□□□ -1.51
LIMK1P53667 AC245128.3-201ENST00000594721 748 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 PPATP2-201ENST00000605635 508 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 AC004241.3-201ENST00000611728 517 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 AL445528.2-201ENST00000620582 470 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.63□□□□□ -1.51
LIMK1P53667 AC132068.1-201ENST00000623805 459 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 FBXL21-201ENST00000297158 1305 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK1P53667 SAMM50P1-201ENST00000455403 1399 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK1P53667 AC109446.4-201ENST00000623235 2755 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.63□□□□□ -1.51
LIMK1P53667 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIMK1P53667 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
LIMK1P53667 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
LIMK1P53667 AC138907.8-201ENST00000623981 2256 ntBASIC5.63□□□□□ -1.51
LIMK1P53667 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
LIMK1P53667 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
LIMK1P53667 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.62□□□□□ -1.51
LIMK1P53667 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
LIMK1P53667 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK1P53667 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK1P53667 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK1P53667 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
LIMK1P53667 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
LIMK1P53667 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK1P53667 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.62□□□□□ -1.51
LIMK1P53667 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
LIMK1P53667 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK1P53667 SNORD1C-201ENST00000363315 78 ntBASIC5.62□□□□□ -1.51
LIMK1P53667 RNA5SP211-201ENST00000365516 117 ntBASIC5.62□□□□□ -1.51
LIMK1P53667 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
LIMK1P53667 AL035419.1-201ENST00000397037 564 ntBASIC5.62□□□□□ -1.51
LIMK1P53667 RPL5P19-201ENST00000404228 893 ntBASIC5.62□□□□□ -1.51
LIMK1P53667 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.62□□□□□ -1.51
LIMK1P53667 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.62□□□□□ -1.51
LIMK1P53667 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.62□□□□□ -1.51
LIMK1P53667 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.62□□□□□ -1.51
LIMK1P53667 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.62□□□□□ -1.51
LIMK1P53667 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.62□□□□□ -1.51
LIMK1P53667 AL354766.1-201ENST00000423396 542 ntBASIC5.62□□□□□ -1.51
LIMK1P53667 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.62□□□□□ -1.51
LIMK1P53667 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.62□□□□□ -1.51
LIMK1P53667 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.62□□□□□ -1.51
LIMK1P53667 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.62□□□□□ -1.51
LIMK1P53667 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.62□□□□□ -1.51
LIMK1P53667 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.62□□□□□ -1.51
LIMK1P53667 AL133244.1-201ENST00000456007 258 ntBASIC5.62□□□□□ -1.51
LIMK1P53667 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.62□□□□□ -1.51
LIMK1P53667 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.62□□□□□ -1.51
LIMK1P53667 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.62□□□□□ -1.51
LIMK1P53667 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.62□□□□□ -1.51
LIMK1P53667 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.62□□□□□ -1.51
LIMK1P53667 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms