Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC022778.1-201ENST00000518302 545 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF144AP50876 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF144AP50876 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RNF144AP50876 AC013828.2-201ENST00000532487 235 ntBASIC7.09□□□□□ -1.27
RNF144AP50876 AP003174.3-201ENST00000537926 516 ntBASIC7.09□□□□□ -1.27
RNF144AP50876 NPIPP1-203ENST00000547107 1071 ntBASIC7.09□□□□□ -1.27
RNF144AP50876 AC068305.2-201ENST00000550567 1205 ntBASIC7.09□□□□□ -1.27
RNF144AP50876 CHCHD3P2-201ENST00000550751 639 ntBASIC7.09□□□□□ -1.27
RNF144AP50876 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.09□□□□□ -1.27
RNF144AP50876 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC7.09□□□□□ -1.27
RNF144AP50876 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF144AP50876 AC005668.1-201ENST00000571142 476 ntBASIC7.09□□□□□ -1.27
RNF144AP50876 MRPS21P9-201ENST00000571150 257 ntBASIC7.09□□□□□ -1.27
RNF144AP50876 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF144AP50876 AC100830.2-201ENST00000581636 240 ntBASIC7.09□□□□□ -1.27
RNF144AP50876 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC7.09□□□□□ -1.27
RNF144AP50876 AC010327.2-201ENST00000587647 488 ntBASIC7.09□□□□□ -1.27
RNF144AP50876 7SK.7-201ENST00000603504 247 ntBASIC7.09□□□□□ -1.27
RNF144AP50876 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF144AP50876 AC008115.3-201ENST00000614874 549 ntBASIC7.09□□□□□ -1.27
RNF144AP50876 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF144AP50876 AC022743.1-201ENST00000624990 664 ntBASIC7.09□□□□□ -1.27
RNF144AP50876 AC005618.4-201ENST00000625053 554 ntBASIC7.09□□□□□ -1.27
RNF144AP50876 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF144AP50876 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF144AP50876 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
RNF144AP50876 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF144AP50876 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF144AP50876 AP004289.1-201ENST00000436307 2205 ntBASIC7.09□□□□□ -1.27
RNF144AP50876 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF144AP50876 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
RNF144AP50876 AL356361.1-201ENST00000400943 1459 ntBASIC7.09□□□□□ -1.27
RNF144AP50876 SF3A3P1-201ENST00000446317 1477 ntBASIC7.09□□□□□ -1.27
RNF144AP50876 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF144AP50876 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF144AP50876 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF144AP50876 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF144AP50876 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.09□□□□□ -1.27
RNF144AP50876 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
RNF144AP50876 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
RNF144AP50876 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
RNF144AP50876 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF144AP50876 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF144AP50876 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
RNF144AP50876 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF144AP50876 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 GAPDHP24-201ENST00000328713 983 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 Y_RNA.133-201ENST00000363428 110 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 RNU6-331P-201ENST00000384724 107 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
RNF144AP50876 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF144AP50876 AL034403.1-201ENST00000399414 885 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 TMSB4XP8-201ENST00000402089 135 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 RNU2-62P-201ENST00000410868 191 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 TMSB4XP6-201ENST00000415187 135 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF144AP50876 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF144AP50876 GAPDHP73-201ENST00000423411 1007 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
RNF144AP50876 TMSB4XP1-201ENST00000424567 135 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF144AP50876 AC133104.1-201ENST00000429100 218 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 USP9YP16-201ENST00000430287 407 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF144AP50876 RPL31P35-201ENST00000431058 377 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 AC109583.1-201ENST00000432156 268 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 GAPDHP32-201ENST00000433816 998 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 MTND6P18-201ENST00000439477 513 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF144AP50876 USP9YP23-201ENST00000455085 407 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF144AP50876 CTSLP6-201ENST00000458273 1002 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 AC110749.1-201ENST00000462007 357 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
RNF144AP50876 RN7SL12P-201ENST00000473849 290 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 PSMA2P2-201ENST00000504319 686 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 AC093809.1-201ENST00000509155 340 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 Y_RNA.672-201ENST00000516289 104 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF144AP50876 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC7.08□□□□□ -1.28
RNF144AP50876 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC7.08□□□□□ -1.28
RNF144AP50876 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC7.08□□□□□ -1.28
RNF144AP50876 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.08□□□□□ -1.28
RNF144AP50876 AC068587.4-201ENST00000533893 186 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms