Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.59□□□□□ -1.52
TNFSF9P41273 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.59□□□□□ -1.52
TNFSF9P41273 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TNFSF9P41273 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TNFSF9P41273 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TNFSF9P41273 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF9P41273 AC109446.4-201ENST00000623235 2755 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 SAMM50P1-201ENST00000455403 1399 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TNFSF9P41273 CCAT2-201ENST00000630920 1752 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TNFSF9P41273 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF9P41273 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TNFSF9P41273 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF9P41273 RNA5SP514-201ENST00000363717 111 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 RNU4-4P-201ENST00000364588 130 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 RNA5SP223-201ENST00000365174 120 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF9P41273 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TNFSF9P41273 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF9P41273 ADAM24P-201ENST00000398655 2101 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 RN7SKP114-201ENST00000410327 279 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 RPS21P8-201ENST00000413365 247 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF9P41273 AC093162.1-201ENST00000419682 124 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF9P41273 BX323845.1-201ENST00000432417 179 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF9P41273 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFSF9P41273 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFSF9P41273 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFSF9P41273 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 AC027369.5-201ENST00000533838 755 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFSF9P41273 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TNFSF9P41273 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.58□□□□□ -1.52
TNFSF9P41273 AC024940.4-201ENST00000605507 246 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFSF9P41273 AC093297.3-201ENST00000607056 2517 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 AC004656.1-201ENST00000568479 4951 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 AP001029.2-203ENST00000589795 4910 ntBASIC5.58□□□□□ -1.52
TNFSF9P41273 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF9P41273 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF9P41273 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFSF9P41273 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF9P41273 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF9P41273 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF9P41273 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFSF9P41273 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF9P41273 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF9P41273 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TNFSF9P41273 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFSF9P41273 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF9P41273 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF9P41273 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TNFSF9P41273 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF9P41273 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF9P41273 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF9P41273 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF9P41273 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF9P41273 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFSF9P41273 RNA5SP455-201ENST00000365190 119 ntBASIC5.57□□□□□ -1.52
TNFSF9P41273 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFSF9P41273 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF9P41273 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFSF9P41273 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.57□□□□□ -1.52
TNFSF9P41273 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFSF9P41273 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.57□□□□□ -1.52
TNFSF9P41273 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF9P41273 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFSF9P41273 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF9P41273 RN7SKP147-201ENST00000517154 244 ntBASIC5.57□□□□□ -1.52
TNFSF9P41273 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFSF9P41273 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFSF9P41273 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.57□□□□□ -1.52
TNFSF9P41273 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.57□□□□□ -1.52
TNFSF9P41273 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.57□□□□□ -1.52
TNFSF9P41273 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.57□□□□□ -1.52
TNFSF9P41273 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TNFSF9P41273 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TNFSF9P41273 AC005229.3-201ENST00000603438 323 ntBASIC5.57□□□□□ -1.52
TNFSF9P41273 AC026367.3-201ENST00000619032 590 ntBASIC5.57□□□□□ -1.52
TNFSF9P41273 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF9P41273 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFSF9P41273 ZNF402P-201ENST00000404435 3100 ntBASIC5.57□□□□□ -1.52
TNFSF9P41273 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFSF9P41273 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFSF9P41273 AL078595.2-201ENST00000605309 1780 ntBASIC5.57□□□□□ -1.52
TNFSF9P41273 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF9P41273 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.57□□□□□ -1.52
TNFSF9P41273 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TNFSF9P41273 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TNFSF9P41273 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TNFSF9P41273 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
TNFSF9P41273 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF9P41273 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF9P41273 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF9P41273 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF9P41273 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms