Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.26□□□□□ -1.57
RPA3P35244 BTF3P6-201ENST00000448054 499 ntBASIC5.26□□□□□ -1.57
RPA3P35244 PPIAP20-201ENST00000449839 135 ntBASIC5.26□□□□□ -1.57
RPA3P35244 RN7SL547P-201ENST00000490793 290 ntBASIC5.26□□□□□ -1.57
RPA3P35244 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.26□□□□□ -1.57
RPA3P35244 HMGB1P44-201ENST00000508597 572 ntBASIC5.26□□□□□ -1.57
RPA3P35244 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.26□□□□□ -1.57
RPA3P35244 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.26□□□□□ -1.57
RPA3P35244 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RPA3P35244 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RPA3P35244 AC060766.1-201ENST00000590824 627 ntBASIC5.26□□□□□ -1.57
RPA3P35244 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.26□□□□□ -1.57
RPA3P35244 AC079395.2-201ENST00000610982 737 ntBASIC5.26□□□□□ -1.57
RPA3P35244 AL353684.1-201ENST00000622677 1120 ntBASIC5.26□□□□□ -1.57
RPA3P35244 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.26□□□□□ -1.57
RPA3P35244 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RPA3P35244 AC006210.2-201ENST00000367074 1545 ntBASIC5.26□□□□□ -1.57
RPA3P35244 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
RPA3P35244 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.26□□□□□ -1.57
RPA3P35244 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.26□□□□□ -1.57
RPA3P35244 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RPA3P35244 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RPA3P35244 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
RPA3P35244 RNA5SP223-201ENST00000365174 120 ntBASIC5.25□□□□□ -1.57
RPA3P35244 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RPA3P35244 SRSF1P1-201ENST00000424058 520 ntBASIC5.25□□□□□ -1.57
RPA3P35244 AC007386.1-201ENST00000455212 582 ntBASIC5.25□□□□□ -1.57
RPA3P35244 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.25□□□□□ -1.57
RPA3P35244 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.25□□□□□ -1.57
RPA3P35244 TPT1P1-201ENST00000458495 518 ntBASIC5.25□□□□□ -1.57
RPA3P35244 RN7SL184P-201ENST00000488308 297 ntBASIC5.25□□□□□ -1.57
RPA3P35244 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.25□□□□□ -1.57
RPA3P35244 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.25□□□□□ -1.57
RPA3P35244 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.25□□□□□ -1.57
RPA3P35244 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.25□□□□□ -1.57
RPA3P35244 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.25□□□□□ -1.57
RPA3P35244 AC068993.1-201ENST00000546724 589 ntBASIC5.25□□□□□ -1.57
RPA3P35244 AC005341.1-201ENST00000571086 708 ntBASIC5.25□□□□□ -1.57
RPA3P35244 AC011840.5-201ENST00000582125 771 ntBASIC5.25□□□□□ -1.57
RPA3P35244 SUGT1P3-202ENST00000604259 383 ntBASIC5.25□□□□□ -1.57
RPA3P35244 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.25□□□□□ -1.57
RPA3P35244 AC000068.2-201ENST00000608816 460 ntBASIC5.25□□□□□ -1.57
RPA3P35244 AC005840.5-201ENST00000619166 599 ntBASIC5.25□□□□□ -1.57
RPA3P35244 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.25□□□□□ -1.57
RPA3P35244 SAMMSON-209ENST00000641222 1100 ntBASIC5.25□□□□□ -1.57
RPA3P35244 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RPA3P35244 BX284613.1-201ENST00000452221 1641 ntBASIC5.25□□□□□ -1.57
RPA3P35244 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RPA3P35244 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPA3P35244 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPA3P35244 STX3-208ENST00000641815 3236 ntBASIC5.24□□□□□ -1.57
RPA3P35244 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPA3P35244 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPA3P35244 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.24□□□□□ -1.57
RPA3P35244 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPA3P35244 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RPA3P35244 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RPA3P35244 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RPA3P35244 AC027279.1-201ENST00000568885 4284 ntBASIC5.24□□□□□ -1.57
RPA3P35244 RNA5SP132-201ENST00000364725 118 ntBASIC5.24□□□□□ -1.57
RPA3P35244 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RPA3P35244 U3.25-201ENST00000391209 220 ntBASIC5.24□□□□□ -1.57
RPA3P35244 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.24□□□□□ -1.57
RPA3P35244 RN7SKP59-201ENST00000410520 314 ntBASIC5.24□□□□□ -1.57
RPA3P35244 GABARAPL3-201ENST00000412799 354 ntBASIC5.24□□□□□ -1.57
RPA3P35244 CYCSP6-201ENST00000434498 302 ntBASIC5.24□□□□□ -1.57
RPA3P35244 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.24□□□□□ -1.57
RPA3P35244 GAPDHP58-201ENST00000438477 1006 ntBASIC5.24□□□□□ -1.57
RPA3P35244 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.24□□□□□ -1.57
RPA3P35244 RPL7AP61-201ENST00000443410 636 ntBASIC5.24□□□□□ -1.57
RPA3P35244 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.24□□□□□ -1.57
RPA3P35244 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.24□□□□□ -1.57
RPA3P35244 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.24□□□□□ -1.57
RPA3P35244 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.24□□□□□ -1.57
RPA3P35244 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPA3P35244 RN7SL447P-201ENST00000494711 245 ntBASIC5.24□□□□□ -1.57
RPA3P35244 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.24□□□□□ -1.57
RPA3P35244 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.24□□□□□ -1.57
RPA3P35244 RPL7L1P4-201ENST00000513004 707 ntBASIC5.24□□□□□ -1.57
RPA3P35244 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.24□□□□□ -1.57
RPA3P35244 BX510359.5-201ENST00000515651 304 ntBASIC5.24□□□□□ -1.57
RPA3P35244 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.24□□□□□ -1.57
RPA3P35244 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.24□□□□□ -1.57
RPA3P35244 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPA3P35244 BLZF2P-201ENST00000553776 1130 ntBASIC5.24□□□□□ -1.57
RPA3P35244 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.24□□□□□ -1.57
RPA3P35244 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPA3P35244 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.24□□□□□ -1.57
RPA3P35244 AL034374.2-201ENST00000605281 548 ntBASIC5.24□□□□□ -1.57
RPA3P35244 AC108359.1-201ENST00000616451 1211 ntBASIC5.24□□□□□ -1.57
RPA3P35244 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.24□□□□□ -1.57
RPA3P35244 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.24□□□□□ -1.57
RPA3P35244 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.24□□□□□ -1.57
RPA3P35244 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPA3P35244 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RPA3P35244 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.24□□□□□ -1.57
RPA3P35244 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPA3P35244 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.24□□□□□ -1.57
RPA3P35244 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RPA3P35244 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms