Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMAP28067 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMAP28067 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMAP28067 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMAP28067 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMAP28067 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMAP28067 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMAP28067 AC107027.3-201ENST00000565095 3473 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DMAP28067 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 AK4P4-201ENST00000419465 646 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 VN1R110P-201ENST00000438988 971 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 HSPE1P22-201ENST00000456856 327 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 RN7SL814P-201ENST00000487715 300 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 RN7SL193P-201ENST00000491708 276 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC112484.3-201ENST00000505910 329 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC109464.1-201ENST00000511091 819 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC021146.3-201ENST00000511911 260 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 RNA5SP249-201ENST00000516127 99 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 IGKV3D-25-201ENST00000519599 235 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC018442.3-201ENST00000523025 183 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 HNRNPRP2-201ENST00000528421 743 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 RBM7-208ENST00000545678 867 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 RN7SL230P-201ENST00000580835 303 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC092266.1-201ENST00000610958 165 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DMAP28067 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC079298.2-201ENST00000623885 459 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 AP003499.2-201ENST00000624100 483 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 AL390318.1-201ENST00000624564 687 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DMAP28067 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HLA-DMAP28067 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DMAP28067 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DMAP28067 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DMAP28067 CASC19-204ENST00000641001 2055 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 AC063976.2-201ENST00000425667 3556 ntBASIC4.57□□□□□ -1.68
HLA-DMAP28067 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.56□□□□□ -1.68
HLA-DMAP28067 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMAP28067 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HLA-DMAP28067 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
HLA-DMAP28067 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMAP28067 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMAP28067 RN7SKP153-201ENST00000365026 316 ntBASIC4.56□□□□□ -1.68
HLA-DMAP28067 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMAP28067 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DMAP28067 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.56□□□□□ -1.68
HLA-DMAP28067 AC013470.3-201ENST00000420252 1194 ntBASIC4.56□□□□□ -1.68
HLA-DMAP28067 AKR1B10P1-201ENST00000425765 942 ntBASIC4.56□□□□□ -1.68
HLA-DMAP28067 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DMAP28067 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DMAP28067 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DMAP28067 AL450263.2-201ENST00000439400 589 ntBASIC4.56□□□□□ -1.68
HLA-DMAP28067 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DMAP28067 AC068491.1-201ENST00000449539 1241 ntBASIC4.56□□□□□ -1.68
HLA-DMAP28067 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DMAP28067 BX842559.2-201ENST00000451418 605 ntBASIC4.56□□□□□ -1.68
HLA-DMAP28067 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMAP28067 RPS6P2-201ENST00000454208 705 ntBASIC4.56□□□□□ -1.68
HLA-DMAP28067 RPL7AP28-201ENST00000464513 571 ntBASIC4.56□□□□□ -1.68
HLA-DMAP28067 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DMAP28067 RPS17P15-201ENST00000475609 349 ntBASIC4.56□□□□□ -1.68
HLA-DMAP28067 RNA5SP360-201ENST00000516555 118 ntBASIC4.56□□□□□ -1.68
HLA-DMAP28067 AC027308.1-201ENST00000517993 110 ntBASIC4.56□□□□□ -1.68
HLA-DMAP28067 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DMAP28067 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMAP28067 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DMAP28067 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HLA-DMAP28067 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMAP28067 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DMAP28067 AC096553.1-201ENST00000605169 829 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms