Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC138832.1-201ENST00000522871 556 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.45□□□□□ -1.54
TNFSF4P23510 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.45□□□□□ -1.54
TNFSF4P23510 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFSF4P23510 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TNFSF4P23510 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.45□□□□□ -1.54
TNFSF4P23510 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFSF4P23510 AC138207.8-204ENST00000579588 527 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFSF4P23510 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.45□□□□□ -1.54
TNFSF4P23510 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFSF4P23510 AC234772.3-201ENST00000602277 528 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 AC022022.2-201ENST00000602989 360 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 AC009027.1-201ENST00000604510 479 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 AC009237.12-201ENST00000604755 742 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 AC140725.3-201ENST00000616193 880 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFSF4P23510 AL122023.1-201ENST00000622847 530 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFSF4P23510 AC097520.1-201ENST00000624435 385 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFSF4P23510 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFSF4P23510 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFSF4P23510 AC010325.3-201ENST00000641084 394 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF4P23510 AL118496.1-201ENST00000440201 1812 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF4P23510 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFSF4P23510 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF4P23510 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF4P23510 AC022034.1-201ENST00000512867 2156 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF4P23510 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFSF4P23510 UGT2B27P-201ENST00000505092 1620 ntBASIC5.45□□□□□ -1.54
TNFSF4P23510 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
TNFSF4P23510 AC090017.1-201ENST00000548612 1779 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 LINC01613-201ENST00000561476 2780 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 AC009229.4-201ENST00000623854 1947 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF4P23510 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF4P23510 AC119674.1-213ENST00000641177 1386 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF4P23510 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF4P23510 AC134882.1-201ENST00000603738 1676 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF4P23510 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
TNFSF4P23510 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF4P23510 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF4P23510 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TNFSF4P23510 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF4P23510 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF4P23510 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TNFSF4P23510 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TNFSF4P23510 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF4P23510 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TNFSF4P23510 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF4P23510 AP002530.1-201ENST00000405705 684 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF4P23510 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.44□□□□□ -1.54
TNFSF4P23510 RPL21P50-201ENST00000417698 477 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.44□□□□□ -1.54
TNFSF4P23510 RPF2P1-201ENST00000424137 906 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 AC009965.2-201ENST00000425328 970 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.44□□□□□ -1.54
TNFSF4P23510 RPL5P2-201ENST00000429598 854 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 IGLV3-4-201ENST00000432300 244 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF4P23510 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.44□□□□□ -1.54
TNFSF4P23510 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
TNFSF4P23510 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.44□□□□□ -1.54
TNFSF4P23510 AC112492.1-201ENST00000449607 712 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 RHEBP2-201ENST00000450289 600 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.44□□□□□ -1.54
TNFSF4P23510 SNX18P26-201ENST00000458433 740 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 RN7SL643P-201ENST00000471845 291 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 RPL7P6-201ENST00000480903 738 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 AC004815.1-201ENST00000484185 331 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF4P23510 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF4P23510 AC113367.2-201ENST00000505749 160 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 AC118282.2-201ENST00000508739 374 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 RNU6-416P-201ENST00000516265 103 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.44□□□□□ -1.54
TNFSF4P23510 AP003033.2-201ENST00000528901 805 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.44□□□□□ -1.54
TNFSF4P23510 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF4P23510 TPRX1P1-201ENST00000557620 319 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.44□□□□□ -1.54
TNFSF4P23510 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.44□□□□□ -1.54
TNFSF4P23510 AC007346.2-201ENST00000564816 892 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.44□□□□□ -1.54
TNFSF4P23510 AC233702.7-202ENST00000582941 211 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 MIR4420-201ENST00000583944 77 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.44□□□□□ -1.54
TNFSF4P23510 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.44□□□□□ -1.54
TNFSF4P23510 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.44□□□□□ -1.54
TNFSF4P23510 AC067852.5-201ENST00000589299 310 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 CCDC58P3-201ENST00000590792 430 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 AC063977.7-201ENST00000594454 337 ntBASIC5.44□□□□□ -1.54
TNFSF4P23510 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms