Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC8.08□□□□□ -1.12
COL9A1P20849 OR5M2P-201ENST00000529003 936 ntBASIC8.08□□□□□ -1.12
COL9A1P20849 OR4R1P-201ENST00000529879 463 ntBASIC8.08□□□□□ -1.12
COL9A1P20849 ASB8-207ENST00000536953 923 ntTSL 2 BASIC8.08□□□□□ -1.12
COL9A1P20849 ARL1-211ENST00000551828 776 ntTSL 5 BASIC8.08□□□□□ -1.12
COL9A1P20849 AL162632.2-201ENST00000553933 399 ntBASIC8.08□□□□□ -1.12
COL9A1P20849 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC8.08□□□□□ -1.12
COL9A1P20849 AC051619.2-201ENST00000559063 397 ntBASIC8.08□□□□□ -1.12
COL9A1P20849 AC053481.3-201ENST00000577881 843 ntBASIC8.08□□□□□ -1.12
COL9A1P20849 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC8.08□□□□□ -1.12
COL9A1P20849 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC8.08□□□□□ -1.12
COL9A1P20849 RPL23AP77-201ENST00000588044 463 ntBASIC8.08□□□□□ -1.12
COL9A1P20849 AC130324.3-201ENST00000614165 542 ntBASIC8.08□□□□□ -1.12
COL9A1P20849 AC096861.1-201ENST00000616652 240 ntBASIC8.08□□□□□ -1.12
COL9A1P20849 BANCR-201ENST00000624238 473 ntTSL 2 BASIC8.08□□□□□ -1.12
COL9A1P20849 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC8.08□□□□□ -1.12
COL9A1P20849 HMBOX1-201ENST00000287701 3184 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
COL9A1P20849 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
COL9A1P20849 ASAP1-IT2-201ENST00000626977 2031 ntBASIC8.08□□□□□ -1.12
COL9A1P20849 AC016722.3-201ENST00000568862 2463 ntBASIC8.08□□□□□ -1.12
COL9A1P20849 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
COL9A1P20849 JAZF1-AS1-202ENST00000444500 3684 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
COL9A1P20849 ARHGAP42P1-201ENST00000507474 1976 ntBASIC8.08□□□□□ -1.12
COL9A1P20849 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC8.08□□□□□ -1.12
COL9A1P20849 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC8.08□□□□□ -1.12
COL9A1P20849 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
COL9A1P20849 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL9A1P20849 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL9A1P20849 ADIPOQ-AS1-201ENST00000422718 3443 ntTSL 5 BASIC8.07□□□□□ -1.12
COL9A1P20849 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
COL9A1P20849 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
COL9A1P20849 AC073349.2-201ENST00000427545 1603 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
COL9A1P20849 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
COL9A1P20849 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL9A1P20849 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
COL9A1P20849 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL9A1P20849 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL9A1P20849 AL049543.1-201ENST00000499525 2874 ntTSL 2 BASIC8.07□□□□□ -1.12
COL9A1P20849 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
COL9A1P20849 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL9A1P20849 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL9A1P20849 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
COL9A1P20849 SNORA20.2-201ENST00000383922 131 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 RN7SKP148-201ENST00000410179 275 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 AL356968.1-201ENST00000416622 474 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 VDAC1P10-201ENST00000416715 891 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 MCFD2P1-201ENST00000417812 300 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 GAPDHP73-201ENST00000423411 1007 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 AC231532.1-201ENST00000438584 312 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 AC234771.4-201ENST00000441416 730 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC8.07□□□□□ -1.12
COL9A1P20849 AL392103.1-201ENST00000447000 198 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 RPL7P59-201ENST00000447700 943 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC8.07□□□□□ -1.12
COL9A1P20849 PRPF38AP1-201ENST00000451976 933 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 TRGVB-201ENST00000453257 471 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 AL356010.1-201ENST00000456364 102 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC8.07□□□□□ -1.12
COL9A1P20849 Y_RNA.653-201ENST00000459091 95 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 UCK2-205ENST00000469256 753 ntTSL 3 BASIC8.07□□□□□ -1.12
COL9A1P20849 RN7SL568P-201ENST00000493069 298 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC8.07□□□□□ -1.12
COL9A1P20849 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC8.07□□□□□ -1.12
COL9A1P20849 AC113352.1-201ENST00000513196 666 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 RNU6-635P-201ENST00000516651 102 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC8.07□□□□□ -1.12
COL9A1P20849 AP000827.1-201ENST00000527814 258 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC8.07□□□□□ -1.12
COL9A1P20849 AC093519.1-201ENST00000566109 298 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC8.07□□□□□ -1.12
COL9A1P20849 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.07□□□□□ -1.12
COL9A1P20849 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC8.07□□□□□ -1.12
COL9A1P20849 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC8.07□□□□□ -1.12
COL9A1P20849 RNU6-89P-201ENST00000606519 100 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 AC004908.1-201ENST00000606572 541 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 AL162373.1-201ENST00000620433 407 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC8.07□□□□□ -1.12
COL9A1P20849 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
COL9A1P20849 AC010149.2-201ENST00000637608 315 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 AC079776.5-201ENST00000641920 211 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 FAM205BP-202ENST00000399773 4009 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 AC032011.1-201ENST00000611703 1549 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
COL9A1P20849 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL9A1P20849 HCG18-244ENST00000602516 2890 ntBASIC8.07□□□□□ -1.12
COL9A1P20849 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL9A1P20849 CCNK-201ENST00000389879 3524 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
COL9A1P20849 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC8.07□□□□□ -1.12
COL9A1P20849 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC8.07□□□□□ -1.12
COL9A1P20849 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
COL9A1P20849 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC8.06□□□□□ -1.12
COL9A1P20849 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC8.06□□□□□ -1.12
COL9A1P20849 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 AF287957.1-201ENST00000607368 1595 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms